RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NECTIN3Q9NQS3 549 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 NDE1Q9NXR1 346 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 FBXL4Q9UKA2 621 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 G3BP2Q9UN86 482 aaKnown RBP14.54□□□□□ -0.08
SS18-216ENST00000580751 NDUFAF1Q9Y375 327 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 PCDHA9Q9Y5H5 950 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 IGHV1-45A0A0A0MS14 117 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 NSG1A0A0A6YYJ2 146 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 A0A1W2PP18 115 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 ARGFXA6NJG6 315 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 LDB3O75112 727 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 PRKRAO75569 313 aaKnown RBP14.53□□□□□ -0.08
SS18-216ENST00000580751 HPP00738 406 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 IL3P08700 152 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 T-ENOLP0DO92 83 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 HPCAL1P37235 193 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 POLR2JP52435 117 aaKnown RBP14.53□□□□□ -0.08
SS18-216ENST00000580751 OR4D2P58180 307 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 UFM1P61960 85 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 FOLH1Q04609 750 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 SFT2D3Q587I9 215 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 DCAF10Q5QP82 559 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 BORAQ6PGQ7 559 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 ZNF771Q7L3S4 317 aaPredicted RBP14.53□□□□□ -0.08
SS18-216ENST00000580751 FUNDC1Q8IVP5 155 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 TMEM132CQ8N3T6 1108 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 PCYOX1LQ8NBM8 494 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 CLEC1AQ8NC01 280 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 CDC26Q8NHZ8 85 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 APOBEC4Q8WW27 367 aaKnown RBP14.53□□□□□ -0.08
SS18-216ENST00000580751 CRELD1Q96HD1 420 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 MARK4Q96L34 752 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 LPAR4Q99677 370 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 ZNF700Q9H0M5 742 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 EFCAB1Q9HAE3 211 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 ARL8BQ9NVJ2 186 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 EHD3Q9NZN3 535 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 CCDC167Q9P0B6 97 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 PSME2Q9UL46 239 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 KMT2BQ9UMN6 2715 aaPredicted RBP14.53□□□□□ -0.08
SS18-216ENST00000580751 SCN2AQ99250 2005 aa14.53□□□□□ -0.08
SS18-216ENST00000580751 CACNA1BQ00975 2339 aa14.52□□□□□ -0.08
SS18-216ENST00000580751 GLOD5A6NK44 160 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 CFLARO15519 480 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 FGF17O60258 216 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 GPR75O95800 540 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ALDH9A1P49189 494 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 AP2B1P63010 937 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 IGLV3-21P80748 117 aaPredicted RBP14.52□□□□□ -0.09
SS18-216ENST00000580751 PLIN5Q00G26 463 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ACTN3Q08043 901 aaPredicted RBP14.52□□□□□ -0.09
SS18-216ENST00000580751 PTGR1Q14914 329 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 PCOLCEQ15113 449 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 FAM71E1Q6IPT2 247 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 SLC48A1Q6P1K1 146 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 PAPD4Q6PIY7 484 aaKnown RBP14.52□□□□□ -0.09
SS18-216ENST00000580751 HACD2Q6Y1H2 254 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 APLFQ8IW19 511 aaPredicted RBP14.52□□□□□ -0.09
SS18-216ENST00000580751 OR8J2Q8NGG1 315 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 DNAJB14Q8TBM8 379 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ANKRD9Q96BM1 317 aaPredicted RBP14.52□□□□□ -0.09
SS18-216ENST00000580751 SPDL1Q96EA4 605 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 MESP1Q9BRJ9 268 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 PELOQ9BRX2 385 aaKnown RBP14.52□□□□□ -0.09
SS18-216ENST00000580751 ALOXE3Q9BYJ1 711 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ING2Q9H160 280 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 REEP4Q9H6H4 257 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ADAP2Q9NPF8 381 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 MIEF1Q9NQG6 463 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ATAD3AQ9NVI7 634 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 ATP6V1HQ9UI12 483 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 CLDN16Q9Y5I7 305 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 KCNMB2Q9Y691 235 aa14.52□□□□□ -0.09
SS18-216ENST00000580751 CCDC154A6NI56 674 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 TGFBR3LH3BV60 316 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 ANGPT2O15123 496 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 SEC24DO94855 1032 aaPredicted RBP14.51□□□□□ -0.09
SS18-216ENST00000580751 CBX6O95503 412 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 IFNA16P05015 189 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 COX7A2P14406 83 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 DDCP20711 480 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 TACR1P25103 407 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 RHDQ02161 417 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 ID2Q02363 134 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 AIMP2Q13155 320 aaKnown RBP14.51□□□□□ -0.09
SS18-216ENST00000580751 PDE7AQ13946 482 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 ELAVL1Q15717 326 aaKnown RBP14.51□□□□□ -0.09
SS18-216ENST00000580751 EXT1Q16394 746 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 SNX32Q86XE0 403 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 SAMD14Q8IZD0 417 aaPredicted RBP14.51□□□□□ -0.09
SS18-216ENST00000580751 VPS37AQ8NEZ2 397 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 OR4K14Q8NGD5 310 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 ROPN1LQ96C74 230 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 KLHL29Q96CT2 875 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 COQ8BQ96D53 544 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 TSSK3Q96PN8 268 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 WDR77Q9BQA1 342 aaPredicted RBP14.51□□□□□ -0.09
SS18-216ENST00000580751 ZNF160Q9HCG1 818 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 ATP13A2Q9NQ11 1180 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 SLC52A3Q9NQ40 469 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms