RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SERPINB3P29508 390 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 TMED10P49755 219 aaKnown RBP18.65■□□□□ 0.58
SMG8-204ENST00000580498 NRG3P56975 720 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 TRA2BP62995 288 aaKnown RBP18.65■□□□□ 0.58
SMG8-204ENST00000580498 RPP38P78345 283 aaKnown RBP18.65■□□□□ 0.58
SMG8-204ENST00000580498 ASPHQ12797 758 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 LCP2Q13094 533 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 PIGGQ5H8A4 983 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 CFAP157Q5JU67 520 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 ARHGAP11AQ6P4F7 1023 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 Q6ZPB1 254 aaPredicted RBP18.65■□□□□ 0.58
SMG8-204ENST00000580498 COMMD6Q7Z4G1 85 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 MDGA2Q7Z553 956 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 MRGPRGQ86SM5 289 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 SIAH3Q8IW03 269 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 GBP7Q8N8V2 638 aaPredicted RBP18.65■□□□□ 0.58
SMG8-204ENST00000580498 C16orf52Q8NHV5 167 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 SREK1Q8WXA9 508 aaKnown RBP18.65■□□□□ 0.58
SMG8-204ENST00000580498 CCDC120Q96HB5 630 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 TXLNGYQ9BZA5 131 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 CFL2Q9Y281 166 aa18.65■□□□□ 0.58
SMG8-204ENST00000580498 PRSS44E7EML9 344 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 DLX3O60479 287 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 IGKV3-11P04433 115 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 NT5EP21589 574 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 TNFRSF8P28908 595 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 PTGS2P35354 604 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 XKP51811 444 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 PRKAA2P54646 552 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 PPIAP62937 165 aaKnown RBP18.64■□□□□ 0.57
SMG8-204ENST00000580498 ART3Q13508 389 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 C3AR1Q16581 482 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 SLC22A10Q63ZE4 541 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 C16orf47Q6ZP98 133 aaPredicted RBP18.64■□□□□ 0.57
SMG8-204ENST00000580498 HOMEZQ8IX15 550 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 GSPT2Q8IYD1 628 aaKnown RBP18.64■□□□□ 0.57
SMG8-204ENST00000580498 ZNF321PQ8N8H1 164 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 OR2M7Q8NG81 312 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 L3HYPDHQ96EM0 354 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 TMEM237Q96Q45 408 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 IQCGQ9H095 443 aaKnown RBP18.64■□□□□ 0.57
SMG8-204ENST00000580498 GRID1Q9ULK0 1009 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 ZNF835Q9Y2P0 537 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 ZNF780BQ9Y6R6 833 aa18.64■□□□□ 0.57
SMG8-204ENST00000580498 C2orf92A0A1B0GVN3 265 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 TMEM200CA6NKL6 621 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 MANBAO00462 879 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 TP53I11O14683 189 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 HS6ST1O60243 411 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 CDH16O75309 829 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 PORP16435 677 aaPredicted RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 RFC3P40938 356 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 UNC50Q53HI1 259 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 SPIN4Q56A73 249 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 RPS27LQ71UM5 84 aaKnown RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 SAMD14Q8IZD0 417 aaPredicted RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 CCNYL1Q8N7R7 359 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 OR7G1Q8NGA0 311 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 RDH11Q8TC12 318 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 SPACA9Q96E40 222 aaPredicted RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 L2HGDHQ9H9P8 463 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 CHST11Q9NPF2 352 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 PFDN4Q9NQP4 134 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 GIMAP4Q9NUV9 329 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 TEX10Q9NXF1 929 aaPredicted RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 CNIH4Q9P003 139 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 TINAGQ9UJW2 476 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 BOKQ9UMX3 212 aaPredicted RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 PCDHA9Q9Y5H5 950 aa18.63■□□□□ 0.57
SMG8-204ENST00000580498 KLF2Q9Y5W3 355 aaPredicted RBP18.63■□□□□ 0.57
SMG8-204ENST00000580498 GNG14A0A1W2PPG7 69 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 SMIM23A6NLE4 172 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 COPEO14579 308 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 TPOP07202 933 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 SBK3P0C264 359 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 CSNK2A2P19784 350 aaPredicted RBP18.62■□□□□ 0.57
SMG8-204ENST00000580498 AGAP20933 346 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 GSTM5P46439 218 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 SLCO1A2P46721 670 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 ALDH9A1P49189 494 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 ACSM2AQ08AH3 577 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 IMPG1Q17R60 797 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 ZNF750Q32MQ0 723 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 ACSM2BQ68CK6 577 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 TDRPQ86YL5 185 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 C9orf40Q8IXQ3 194 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 TMEM151AQ8N4L1 468 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 FAM13CQ8NE31 585 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 KLHL29Q96CT2 875 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 WWTR1Q9GZV5 400 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 IL1RL2Q9HB29 575 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 FARSBQ9NSD9 589 aaKnown RBP18.62■□□□□ 0.57
SMG8-204ENST00000580498 COQ3Q9NZJ6 369 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 B4GALT7Q9UBV7 327 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 MCM8Q9UJA3 840 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 GTF3C1Q12789 2109 aa18.62■□□□□ 0.57
SMG8-204ENST00000580498 E9PLN8 166 aa18.61■□□□□ 0.57
SMG8-204ENST00000580498 PGRMC2O15173 223 aa18.61■□□□□ 0.57
SMG8-204ENST00000580498 ERAL1O75616 437 aaKnown RBP18.61■□□□□ 0.57
SMG8-204ENST00000580498 CPMP14384 443 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms