RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SLC25A16P16260 332 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 NMBRP28336 390 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 HNRNPH1P31943 449 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 PCYT1AP49585 367 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 LHX2P50458 406 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 TPD52P55327 224 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 CLDN18P56856 261 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 GPS1Q13098 491 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 TSC22D1Q15714 1073 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 LCTLQ6UWM7 567 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 STAC2Q6ZMT1 411 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 ABHD11Q8NFV4 315 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 OR4K1Q8NGD4 311 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 SPPL2AQ8TCT8 520 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 FAM168AQ92567 244 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 FAR2Q96K12 515 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 CACNG6Q9BXT2 260 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 PCBD2Q9H0N5 130 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 PROCRQ9UNN8 238 aa12.64□□□□□ -0.39
CSNK1D-213ENST00000580446 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 ERI3O43414 337 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 PSTPIP1O43586 416 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 HCRTR2O43614 444 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 CTNSO60931 367 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 PAMP19021 973 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 ARNTP27540 789 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 PLA2G16P53816 162 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 EEF1A1P68104 462 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 TBL3Q12788 808 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 RPS6KA2Q15349 733 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 CTU2Q2VPK5 515 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 CILP2Q8IUL8 1156 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 KATNAL2Q8IYT4 538 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 RCOR2Q8IZ40 523 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 SNX31Q8N9S9 440 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 C10orf105Q8TEF2 133 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 CCT6BQ92526 530 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 NEIL2Q969S2 332 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 C11orf24Q96F05 449 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 SNF8Q96H20 258 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 ZNF696Q9H7X3 374 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 CLK4Q9HAZ1 481 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 GALNT9Q9HCQ5 603 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 PDE10AQ9Y233 779 aa12.63□□□□□ -0.39
CSNK1D-213ENST00000580446 ANKRD33BA6NCL7 494 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 PJA2O43164 708 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 B3GALT2O43825 422 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 RAMP1O60894 148 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 GAS8O95995 478 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 IGKV3-11P04433 115 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 CD3EP07766 207 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 GCKP35557 465 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 GMPRP36959 345 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 CASP3P42574 277 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 SLC1A1P43005 524 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 LIM2P55344 173 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 C21orf58P58505 322 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 REEP5Q00765 189 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 FUT7Q11130 342 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 DOC2AQ14183 400 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 MILR1Q7Z6M3 343 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 PRUNE1Q86TP1 453 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 LINC00523Q86TU6 105 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 OR1J4Q8NGS1 313 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 WWTR1Q9GZV5 400 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 RIMKLBQ9ULI2 386 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 MRPS33Q9Y291 106 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 MED16Q9Y2X0 877 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
CSNK1D-213ENST00000580446 YLPM1P49750 1951 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 EIF3FO00303 357 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 TP53I11O14683 189 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 SNX4O95219 450 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 VAPBO95292 243 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 ESR1P03372 595 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 MPC1LP0DKB6 136 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 CD8BP10966 210 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 CHMP24386 653 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 SESN2P58004 480 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 HERVK_113P63132 956 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 ERVK-8P63133 956 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 TBCELQ5QJ74 424 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 RINLQ6ZS11 566 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 ERVK-19Q9WJR5 959 aa12.61□□□□□ -0.39
CSNK1D-213ENST00000580446 IGHV4-61A0A0C4DH41 118 aa12.6□□□□□ -0.39
CSNK1D-213ENST00000580446 URADA6NGE7 173 aa12.6□□□□□ -0.39
CSNK1D-213ENST00000580446 EMC8O43402 210 aa12.6□□□□□ -0.39
CSNK1D-213ENST00000580446 SERPINC1P01008 464 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms