RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 CRLF3Q8IUI8 442 aa20.16■□□□□ 0.82
TSEN54-207ENST00000580013 OR1N1Q8NGS0 311 aa20.16■□□□□ 0.82
TSEN54-207ENST00000580013 C9orf43Q8TAL5 461 aaPredicted RBP20.16■□□□□ 0.82
TSEN54-207ENST00000580013 DYDC1Q8WWB3 177 aa20.16■□□□□ 0.82
TSEN54-207ENST00000580013 PPP1R36Q96LQ0 422 aa20.16■□□□□ 0.82
TSEN54-207ENST00000580013 AGAP4Q96P64 663 aa20.16■□□□□ 0.82
TSEN54-207ENST00000580013 SLC35C2Q9NQQ7 365 aa20.16■□□□□ 0.82
TSEN54-207ENST00000580013 TLN1Q9Y490 2541 aaKnown RBP20.16■□□□□ 0.82
TSEN54-207ENST00000580013 GABRR3A8MPY1 467 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 MYO1GB0I1T2 1018 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 CLPSP04118 112 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 ATP1B1P05026 303 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 TNNI3P19429 210 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 FEN1P39748 380 aaKnown RBP20.15■□□□□ 0.82
TSEN54-207ENST00000580013 MAP4K2Q12851 820 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 PDE7AQ13946 482 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 CRB2Q5IJ48 1285 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 B3GNTL1Q67FW5 361 aaPredicted RBP20.15■□□□□ 0.82
TSEN54-207ENST00000580013 FAM180BQ6P0A1 224 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 TICAM1Q8IUC6 712 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 RIMKLAQ8IXN7 391 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 LIX1Q8N485 282 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 ARFGAP2Q8N6H7 521 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 FNDC5Q8NAU1 212 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 SUN3Q8TAQ9 357 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 SLC2A12Q8TD20 617 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 RIT1Q92963 219 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 NCLNQ969V3 563 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 CTHRC1Q96CG8 243 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 KLHL29Q96CT2 875 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 VMP1Q96GC9 406 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 TSSK3Q96PN8 268 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 REEP4Q9H6H4 257 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 WDR55Q9H6Y2 383 aaPredicted RBP20.15■□□□□ 0.82
TSEN54-207ENST00000580013 ZNF71Q9NQZ8 489 aaPredicted RBP20.15■□□□□ 0.82
TSEN54-207ENST00000580013 ZNF639Q9UID6 485 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 RALYQ9UKM9 306 aaKnown RBP20.15■□□□□ 0.82
TSEN54-207ENST00000580013 ZNF451Q9Y4E5 1061 aa20.15■□□□□ 0.82
TSEN54-207ENST00000580013 FAM208BQ5VWN6 2430 aa20.14■□□□□ 0.82
TSEN54-207ENST00000580013 TRPC5OSA6NMA1 111 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 PRKNO60260 465 aaPredicted RBP20.14■□□□□ 0.81
TSEN54-207ENST00000580013 ERAL1O75616 437 aaKnown RBP20.14■□□□□ 0.81
TSEN54-207ENST00000580013 CT62P0C5K7 136 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 LBPP18428 481 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 MAPK1P28482 360 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 ASMTP46597 345 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 C21orf58P58505 322 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 ERVK-8P63133 956 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 FUT7Q11130 342 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 MPEG1Q2M385 716 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 PRICKLE4Q2TBC4 344 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 SLC9B1Q4ZJI4 515 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 EPGNQ6UW88 154 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 ISLR2Q6UXK2 745 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 SIRT6Q8N6T7 355 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 DOK4Q8TEW6 326 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 SLC39A7Q92504 469 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 FBXL20Q96IG2 436 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 C1orf50Q9BV19 199 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 KCNK13Q9HB14 408 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 PTGFRNQ9P2B2 879 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 ATP6V1HQ9UI12 483 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 USH1CQ9Y6N9 552 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 ZNF780BQ9Y6R6 833 aa20.14■□□□□ 0.81
TSEN54-207ENST00000580013 SMG1Q96Q15 3661 aaKnown RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 KALRNO60229 2985 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 OR10H2O60403 315 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 MAN1A2O60476 641 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 TGDSO95455 350 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 G6PDP11413 515 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 COX7A2P14406 83 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 CLCN2P51788 898 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 PGDP52209 483 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 DIO3P55073 304 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 MAD2L1Q13257 205 aaPredicted RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 MFAP5Q13361 173 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 LACTB2Q53H82 288 aaPredicted RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 ASB18Q6ZVZ8 466 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 CCDC116Q8IYX3 515 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 SAMD14Q8IZD0 417 aaPredicted RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 OR8K3Q8NH51 312 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 CLHC1Q8NHS4 586 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 GFM2Q969S9 779 aaKnown RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 EXOSC8Q96B26 276 aaKnown RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 MTERF3Q96E29 417 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 OR8D2Q9GZM6 311 aa20.13■□□□□ 0.81
TSEN54-207ENST00000580013 EIF3LQ9Y262 564 aaKnown RBP20.13■□□□□ 0.81
TSEN54-207ENST00000580013 ANKRD28O15084 1053 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 AKAP10O43572 662 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 ALDOCP09972 364 aaKnown RBP20.12■□□□□ 0.81
TSEN54-207ENST00000580013 EPHA3P29320 983 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 FRKP42685 505 aaPredicted RBP20.12■□□□□ 0.81
TSEN54-207ENST00000580013 CLDN8P56748 225 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 SLC37A1P57057 533 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 MLF1P58340 268 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 ZNF267Q14586 743 aaPredicted RBP20.12■□□□□ 0.81
TSEN54-207ENST00000580013 PTGR1Q14914 329 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 ZNF385BQ569K4 471 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 ACER2Q5QJU3 275 aa20.12■□□□□ 0.81
TSEN54-207ENST00000580013 FAM111BQ6SJ93 734 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms