RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 SUN3Q8TAQ9 357 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 MOAP1Q96BY2 351 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 SLC7A6OSQ96CW6 309 aaPredicted RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 RNF31Q96EP0 1072 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 RBM18Q96H35 190 aaKnown RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 CGREF1Q99674 301 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 BTBD10Q9BSF8 475 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 INPP5KQ9BT40 448 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ALOXE3Q9BYJ1 711 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 TAS2R1Q9NYW7 299 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ACSL6Q9UKU0 697 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 MKL2Q9ULH7 1088 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 PADI2Q9Y2J8 665 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 CDRT15L2A8MXV6 281 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 FXYD1O00168 92 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 PCDH17O14917 1159 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 GYG2O15488 501 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 OR10H2O60403 315 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 HEXBP07686 556 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 HOXB9P17482 250 aaPredicted RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 EFNA1P20827 205 aaPredicted RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 UQCRC2P22695 453 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 PPIBP23284 216 aaKnown RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 CPOXP36551 454 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 NCALDP61601 193 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ID2Q02363 134 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 HSPB3Q12988 150 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 RTP5Q14D33 572 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 C6orf163Q5TEZ5 329 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 LCN10Q6JVE6 187 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 FAM180BQ6P0A1 224 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 C8orf82Q6P1X6 216 aaPredicted RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 RINLQ6ZS11 566 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ZNF621Q6ZSS3 439 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 ZNF771Q7L3S4 317 aaPredicted RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 ZNF551Q7Z340 670 aaPredicted RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 TIPARPQ7Z3E1 657 aaKnown RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 ZNF675Q8TD23 568 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 DGAT2Q96PD7 388 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 SPSB2Q99619 263 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 SH3GL1Q99961 368 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 GPATCH1Q9BRR8 931 aaKnown RBP10.07□□□□□ -0.8
SS18-213ENST00000579640 VN1R1Q9GZP7 353 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 LRMDAQ9H2I8 198 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 IL1RL2Q9HB29 575 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 NECTIN3Q9NQS3 549 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 AP3M1Q9Y2T2 418 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 CLDN16Q9Y5I7 305 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 GMEB1Q9Y692 573 aa10.07□□□□□ -0.8
SS18-213ENST00000579640 TRBV5-3A0A0A0MS03 114 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 TEX51A0A1B0GUA7 166 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 TCRBV16S1A1N1A0A5B0 115 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 IDSB3KWA1 339 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 C21orf140B9A014 251 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 PLOD2O00469 737 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 RAD1O60671 282 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 RECKO95980 971 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 ABCB1P08183 1280 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 MAOAP21397 527 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 NT5EP21589 574 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 PTPN6P29350 595 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 CDKN2CP42773 168 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 EMP2P54851 167 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 PSME3P61289 254 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SLC25A3Q00325 362 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 DUSP2Q05923 314 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 NSDHLQ15738 373 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SPRED3Q2MJR0 410 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 ZNF750Q32MQ0 723 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 BHLHB9Q6PI77 547 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 MARCH9Q86YJ5 346 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 OR8J3Q8NGG0 315 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 OR9A2Q8NGT5 310 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 FBXO27Q8NI29 283 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SFXN5Q8TD22 340 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 METTL21AQ8WXB1 218 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 NXPE2Q96DL1 559 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 ZNF578Q96N58 590 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 ANKRD27Q96NW4 1050 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SOX17Q9H6I2 414 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 CXorf36Q9H7Y0 433 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 AKIRIN1Q9H9L7 192 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 C3orf14Q9HBI5 128 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 ASCL3Q9NQ33 180 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 THSD1Q9NS62 852 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SIRT3Q9NTG7 399 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 VAPAQ9P0L0 249 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SLAMF8Q9P0V8 285 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.06□□□□□ -0.8
SS18-213ENST00000579640 CORO2BQ9UQ03 480 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 PCDHB14Q9Y5E9 798 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 SCN2AQ99250 2005 aa10.06□□□□□ -0.8
SS18-213ENST00000579640 A0A087WV62 115 aa10.05□□□□□ -0.8
SS18-213ENST00000579640 A0A1W2PS29 197 aa10.05□□□□□ -0.8
SS18-213ENST00000579640 TGFBR3LH3BV60 316 aa10.05□□□□□ -0.8
SS18-213ENST00000579640 DYRK3O43781 588 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms