RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ZNF24P17028 368 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 SOX3P41225 446 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 MEOX1P50221 254 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 SLC37A1P57057 533 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 ERVK-8P63133 956 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 ZNF267Q14586 743 aaPredicted RBP13.75□□□□□ -0.21
SS18-212ENST00000579061 PIGGQ5H8A4 983 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 TCHHL1Q5QJ38 904 aaPredicted RBP13.75□□□□□ -0.21
SS18-212ENST00000579061 SLC48A1Q6P1K1 146 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 IL20RBQ6UXL0 311 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 BNC2Q6ZN30 1099 aaPredicted RBP13.75□□□□□ -0.21
SS18-212ENST00000579061 RNF111Q6ZNA4 994 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 C16orf47Q6ZP98 133 aaPredicted RBP13.75□□□□□ -0.21
SS18-212ENST00000579061 SLC29A4Q7RTT9 530 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 SULF2Q8IWU5 870 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 C9orf40Q8IXQ3 194 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 CPSF7Q8N684 471 aaKnown RBP13.75□□□□□ -0.21
SS18-212ENST00000579061 C1orf52Q8N6N3 182 aaKnown RBP13.75□□□□□ -0.21
SS18-212ENST00000579061 CCNYL1Q8N7R7 359 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 GOLM1Q8NBJ4 401 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 UCN3Q969E3 161 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 CAVIN3Q969G5 261 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 SGCZQ96LD1 299 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 HBEGFQ99075 208 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 CNPPD1Q9BV87 410 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 MID1IP1Q9NPA3 183 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 LGALS13Q9UHV8 139 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 CES1P1Q9UKY3 287 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 PSME2Q9UL46 239 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 ERVK-19Q9WJR5 959 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 TLDC2A0PJX2 215 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 GOLGA6L10A6NI86 522 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 NPIPA5E9PKD4 350 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 HRKO00198 91 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 ASNA1O43681 348 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 CPMP14384 443 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 XKP51811 444 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 NAGLUP54802 743 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 FUT7Q11130 342 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 SPIN4Q56A73 249 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 CFAP157Q5JU67 520 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 LIPMQ5VYY2 423 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 GALNT18Q6P9A2 607 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 RTL4Q6ZR62 310 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 FRMD7Q6ZUT3 714 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 MDGA2Q7Z553 956 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 TRABD2AQ86V40 505 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 HOMEZQ8IX15 550 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 GALNT12Q8IXK2 581 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 DND1Q8IYX4 353 aaKnown RBP13.74□□□□□ -0.21
SS18-212ENST00000579061 C4orf33Q8N1A6 199 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 GHDCQ8N2G8 530 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 CCDC63Q8NA47 563 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 ZFP62Q8NB50 900 aaPredicted RBP13.74□□□□□ -0.21
SS18-212ENST00000579061 SLC22A8Q8TCC7 542 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 ACPTQ9BZG2 426 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 SIRT5Q9NXA8 310 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 NPIPA1Q9UND3 350 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 ZNF835Q9Y2P0 537 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 PLLPQ9Y342 182 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 TIMM22Q9Y584 194 aa13.74□□□□□ -0.21
SS18-212ENST00000579061 UTP20O75691 2785 aaKnown RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 UBFD1O14562 309 aaKnown RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 CHN1P15882 459 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 PORP16435 677 aaPredicted RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 DEKP35659 375 aaKnown RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 CA7P43166 264 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 GSTM5P46439 218 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 HTR6P50406 440 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 SRSF11Q05519 484 aaKnown RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 IFFO1Q0D2I5 559 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 ASPHQ12797 758 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 EBPQ15125 230 aaKnown RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 RNFT1Q5M7Z0 435 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 C6orf163Q5TEZ5 329 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 Q6ZPB1 254 aaPredicted RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 MREGQ8N565 214 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 OR2W6PQ8NHA6 318 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 APOPT1Q96IL0 206 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 KCNA7Q96RP8 456 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 TMEM109Q9BVC6 243 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 IQCGQ9H095 443 aaKnown RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
SS18-212ENST00000579061 PCNX1Q96RV3 2341 aa13.73□□□□□ -0.21
SS18-212ENST00000579061 DNAJC13O75165 2243 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 A0A1W2PS29 197 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 ESPNB1AK53 854 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 PCDH7O60245 1069 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 ZNF354AO60765 605 aaPredicted RBP13.72□□□□□ -0.21
SS18-212ENST00000579061 WISP2O76076 250 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 NADKO95544 446 aaPredicted RBP13.72□□□□□ -0.21
SS18-212ENST00000579061 CLPSP04118 112 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 ATP1B1P05026 303 aa13.72□□□□□ -0.21
SS18-212ENST00000579061 DRD2P14416 443 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms