RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 SEC16AO15027 2179 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 ADGRG4Q8IZF6 3080 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 AKAP9Q99996 3911 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PRSS51A0A1B0GVH4 220 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 ASPDHA6ND91 283 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PRORSD1PA6NEY8 169 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 URADA6NGE7 173 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 FXYD1O00168 92 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 NME4O00746 187 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PRICKLE3O43900 615 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 SCRG1O75711 98 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 LDLRP01130 860 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 KLK3P07288 261 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 SLC35G6P0C7Q6 338 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 ANPEPP15144 967 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 POLR2CP19387 275 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 ZNF10P21506 573 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 PPIBP23284 216 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 SSR2P43308 183 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 CAPZBP47756 277 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 TRA2BP62995 288 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 PLIN5Q00G26 463 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 RGS1Q08116 209 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 C2orf80Q0P641 193 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 ELOAQ14241 798 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 RABL3Q5HYI8 236 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PRAMEF17Q5VTA0 474 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 TRIM40Q6P9F5 258 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 IFNEQ86WN2 208 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 ADGRF3Q8IZF5 1079 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 TRIML2Q8N7C3 387 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 RBMXL3Q8N7X1 1067 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 GOLM1Q8NBJ4 401 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 RERGQ96A58 199 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 ZUFSPQ96AP4 578 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 TMEM125Q96AQ2 219 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 THAP11Q96EK4 314 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 ANKRD27Q96NW4 1050 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 F2RL3Q96RI0 385 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 FAIM2Q9BWQ8 316 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 NLNQ9BYT8 704 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 REXO4Q9GZR2 422 aaKnown RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 CHST8Q9H2A9 424 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
SS18-210ENST00000578700 SLC6A20Q9NP91 592 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 FGF21Q9NSA1 209 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 HRASLS2Q9NWW9 162 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 CMTM6Q9NX76 183 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 SPHK1Q9NYA1 384 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 SH3BP4Q9P0V3 963 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 CD300AQ9UGN4 299 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 MAGEL2Q9UJ55 1249 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PACSIN3Q9UKS6 424 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 SLC5A6Q9Y289 635 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PCDHA9Q9Y5H5 950 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 PDZD2O15018 2839 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 DCHS2Q6V1P9 2916 aa9.59□□□□□ -0.87
SS18-210ENST00000578700 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 BTN3A3O00478 584 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 HAT1O14929 419 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 MAP3K7O43318 606 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 CPNE3O75131 537 aaKnown RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 CPSF4O95639 269 aaKnown RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 UGT2B7P16662 529 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 MSX2P35548 267 aaPredicted RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 VHLP40337 213 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 GSK3BP49841 420 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 TAS2R50P59544 299 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 GPR19Q15760 415 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 PLEKHN1Q494U1 663 aaPredicted RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 C1QL3Q5VWW1 255 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 OR4C11Q6IEV9 310 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 LCN10Q6JVE6 187 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 ZNF621Q6ZSS3 439 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 VN1R5Q7Z5H4 357 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 CAMKMTQ7Z624 323 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 PLD3Q8IV08 490 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 FAM156AQ8NDB6 213 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 OR7A2PQ8NGA2 310 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 PYDC1Q8WXC3 89 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 CLIP3Q96DZ5 547 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 FAM120BQ96EK7 910 aaKnown RBP9.58□□□□□ -0.88
SS18-210ENST00000578700 SLC41A2Q96JW4 573 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 EGLN2Q96KS0 407 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 KCNC2Q96PR1 638 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 TBCDQ9BTW9 1192 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 SARGQ9BW04 601 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms