RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 IFNEQ86WN2 208 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 ADGRF3Q8IZF5 1079 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 TRIML2Q8N7C3 387 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 RBMXL3Q8N7X1 1067 aaKnown RBP9.59□□□□□ -0.87
SS18-207ENST00000577636 GOLM1Q8NBJ4 401 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 RERGQ96A58 199 aaPredicted RBP9.59□□□□□ -0.87
SS18-207ENST00000577636 ZUFSPQ96AP4 578 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 TMEM125Q96AQ2 219 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
SS18-207ENST00000577636 THAP11Q96EK4 314 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
SS18-207ENST00000577636 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 ANKRD27Q96NW4 1050 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 F2RL3Q96RI0 385 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 FAIM2Q9BWQ8 316 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 NLNQ9BYT8 704 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 REXO4Q9GZR2 422 aaKnown RBP9.59□□□□□ -0.87
SS18-207ENST00000577636 CHST8Q9H2A9 424 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
SS18-207ENST00000577636 SLC6A20Q9NP91 592 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 FGF21Q9NSA1 209 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 HRASLS2Q9NWW9 162 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 CMTM6Q9NX76 183 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 SPHK1Q9NYA1 384 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 SH3BP4Q9P0V3 963 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 CD300AQ9UGN4 299 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 MAGEL2Q9UJ55 1249 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 PACSIN3Q9UKS6 424 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 SLC5A6Q9Y289 635 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 PCDHA9Q9Y5H5 950 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
SS18-207ENST00000577636 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 BTN3A3O00478 584 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 HAT1O14929 419 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 MAP3K7O43318 606 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 CPNE3O75131 537 aaKnown RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 CPSF4O95639 269 aaKnown RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 UGT2B7P16662 529 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 MSX2P35548 267 aaPredicted RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 VHLP40337 213 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 GSK3BP49841 420 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 TAS2R50P59544 299 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 GPR19Q15760 415 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 PLEKHN1Q494U1 663 aaPredicted RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 C1QL3Q5VWW1 255 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 OR4C11Q6IEV9 310 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 LCN10Q6JVE6 187 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 ZNF621Q6ZSS3 439 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 VN1R5Q7Z5H4 357 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 CAMKMTQ7Z624 323 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 PLD3Q8IV08 490 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 FAM156AQ8NDB6 213 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 OR7A2PQ8NGA2 310 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 PYDC1Q8WXC3 89 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 CLIP3Q96DZ5 547 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 FAM120BQ96EK7 910 aaKnown RBP9.58□□□□□ -0.88
SS18-207ENST00000577636 SLC41A2Q96JW4 573 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 EGLN2Q96KS0 407 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 KCNC2Q96PR1 638 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 TBCDQ9BTW9 1192 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 SARGQ9BW04 601 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 ASF1BQ9NVP2 202 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 GPR83Q9NYM4 423 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 ACTR10Q9NZ32 417 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 ACTR3BQ9P1U1 418 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 EPHA6Q9UF33 1036 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 ATP6V1HQ9UI12 483 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 BTNL2Q9UIR0 455 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 PCDHGB7Q9Y5F8 929 aa9.58□□□□□ -0.88
SS18-207ENST00000577636 IGKV1-8A0A0C4DH67 115 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 A0A0J9YY10 115 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ANKUB1A6NFN9 424 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 GABRR3A8MPY1 467 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 RNASET2O00584 256 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 PLPP1O14494 284 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ACOT8O14734 319 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 GBAP04062 536 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 IL3P08700 152 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 DRD2P14416 443 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 POU3F2P20265 443 aaPredicted RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 IL10P22301 178 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 PSMA4P25789 261 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 ELAVL4P26378 380 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 HTR1EP28566 365 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 PEBP1P30086 187 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 BCL6P41182 706 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 GRIA3P42263 894 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ERFP50548 548 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 PLA2G16P53816 162 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ITGA1P56199 1179 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms