RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TOMM20Q15388 145 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 RNASEH2BQ5TBB1 312 aaKnown RBP12.23□□□□□ -0.45
COPS3-214ENST00000577246 VN1R5Q7Z5H4 357 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 ST13P4Q8IZP2 240 aaPredicted RBP12.23□□□□□ -0.45
COPS3-214ENST00000577246 SNX31Q8N9S9 440 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 ZPLD1Q8TCW7 415 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 WDR34Q96EX3 536 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 Q96MF0 132 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 TM9SF2Q99805 663 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 WDR83Q9BRX9 315 aaKnown RBP12.23□□□□□ -0.45
COPS3-214ENST00000577246 CENPKQ9BS16 269 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 WWTR1Q9GZV5 400 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 PIGMQ9H3S5 423 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 RPF2Q9H7B2 306 aaKnown RBP12.23□□□□□ -0.45
COPS3-214ENST00000577246 SNX15Q9NRS6 342 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 WWOXQ9NZC7 414 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 PHF11Q9UIL8 331 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 C15orf41Q9Y2V0 281 aa12.23□□□□□ -0.45
COPS3-214ENST00000577246 HRNRQ86YZ3 2850 aaPredicted RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 KDM4EB2RXH2 506 aaPredicted RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 OR10H2O60403 315 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 ACTL6AO96019 429 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 BUD31P41223 144 aaPredicted RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 AGFG1P52594 562 aaKnown RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 PGGT1BP53609 377 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 NRG3P56975 720 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 EBPQ15125 230 aaKnown RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 PPP1R7Q15435 360 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 TGFBIQ15582 683 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 TSNQ15631 228 aaKnown RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 PDK4Q16654 411 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 CYP1B1Q16678 543 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 SPRED3Q2MJR0 410 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 CDKL4Q5MAI5 379 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 ZNF793Q6ZN11 406 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 ZNF662Q6ZS27 426 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 ABTB1Q969K4 478 aaPredicted RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 RILPQ96NA2 401 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 UGT2B28Q9BY64 529 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 UBQLN3Q9H347 655 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 POPDC3Q9HBV1 291 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 LZTFL1Q9NQ48 299 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 GALNT8Q9NY28 637 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 SLC17A6Q9P2U8 582 aa12.22□□□□□ -0.45
COPS3-214ENST00000577246 ZNF490Q9ULM2 529 aaPredicted RBP12.22□□□□□ -0.45
COPS3-214ENST00000577246 GOLGA6L10A0A0M3HER8 536 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 NCF1BA6NI72 391 aaPredicted RBP12.21□□□□□ -0.45
COPS3-214ENST00000577246 NCF1CA8MVU1 366 aaPredicted RBP12.21□□□□□ -0.45
COPS3-214ENST00000577246 SMAD7O15105 426 aaKnown RBP12.21□□□□□ -0.45
COPS3-214ENST00000577246 STK16O75716 305 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 LRATO95237 230 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 ACSL3O95573 720 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 NCF1P14598 390 aaPredicted RBP12.21□□□□□ -0.45
COPS3-214ENST00000577246 GGT5P36269 586 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 FNTAP49354 379 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 HERVK_113P63132 956 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 ERVK-8P63133 956 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 IRF8Q02556 426 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 GAB1Q13480 694 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 DOC2AQ14183 400 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 TBCCQ15814 346 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 HLA-DQA1Q5Y7H0 255 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 YTHDF3Q7Z739 585 aaKnown RBP12.21□□□□□ -0.45
COPS3-214ENST00000577246 LUZP2Q86TE4 346 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 OR4N5Q8IXE1 308 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 PDIK1LQ8N165 341 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 VWA5B2Q8N398 1253 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 SPPL2AQ8TCT8 520 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 RIT1Q92963 219 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 UCN3Q969E3 161 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 TP53INP1Q96A56 240 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 PPWD1Q96BP3 646 aaKnown RBP12.21□□□□□ -0.45
COPS3-214ENST00000577246 WDYHV1Q96HA8 205 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 CCL19Q99731 98 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 ERVK-6Q9BXR3 956 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 ANGPTL4Q9BY76 406 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 FETUBQ9UGM5 382 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 ERVK-19Q9WJR5 959 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 SLC6A5Q9Y345 797 aa12.21□□□□□ -0.45
COPS3-214ENST00000577246 FN1P02751 2386 aaKnown RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 C2orf92A0A1B0GVN3 265 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 FAM95CA0A1B0GW59 222 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 INAFM1C9JVW0 142 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 RCBTB2O95199 551 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 KRT15P19012 456 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 GALNSP34059 522 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 SLC12A2P55011 1212 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 SLC37A1P57057 533 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 TNFRSF17Q02223 184 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 PCDH1Q08174 1060 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 SLAMF1Q13291 335 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ZNF267Q14586 743 aaPredicted RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 C18orf21Q32NC0 220 aaPredicted RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 SULT1C3Q6IMI6 304 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ADNP2Q6IQ32 1131 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 C20orf204Q6ZNR8 217 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms