RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CAPN13Q6MZZ7 669 aaPredicted RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 NEK5Q6P3R8 708 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 RBM43Q6ZSC3 357 aaKnown RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 LRRC49Q8IUZ0 686 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 KDM8Q8N371 416 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 MRPL43Q8N983 215 aaKnown RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 COLGALT1Q8NBJ5 622 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 CCDC197Q8NCU1 140 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 MAPK1IP1LQ8NDC0 245 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 ZNF540Q8NDQ6 660 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 OR6M1Q8NGM8 313 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 OR2L2Q8NH16 312 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 UBTD2Q8WUN7 234 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 SMPDL3AQ92484 453 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 FCGR1BQ92637 280 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 C11orf52Q96A22 123 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 SYAP1Q96A49 352 aaPredicted RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 MRPL38Q96DV4 380 aaKnown RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 CNRIP1Q96F85 164 aaPredicted RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 WBP1Q96G27 269 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 RBM18Q96H35 190 aaKnown RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 VPS39Q96JC1 886 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 C18orf12Q96KH6 178 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 SAMD8Q96LT4 415 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 FAM218AQ96MZ4 157 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 VGLL1Q99990 258 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 CARD6Q9BX69 1037 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 NUSAP1Q9BXS6 441 aaKnown RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 TEX13BQ9BXU2 312 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 GFRA4Q9GZZ7 299 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 DPEP3Q9H4B8 488 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 COQ10BQ9H8M1 238 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 JPT2Q9H910 190 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 ELL3Q9HB65 397 aaPredicted RBP2.1□□□□□ -2.07
COPS3-213ENST00000577210 HOMER3Q9NSC5 361 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 TMOD2Q9NZR1 351 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 COPS7AQ9UBW8 275 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 MGAT4AQ9UM21 535 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 NEDD4P46934 1319 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 SPATA31D1Q6ZQQ2 1576 aa2.1□□□□□ -2.07
COPS3-213ENST00000577210 DOCK7Q96N67 2140 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 SNED1Q8TER0 1413 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 KIAA1210Q9ULL0 1709 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 A0A0U1RRA0 63 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 RNF212BA8MTL3 300 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 ARHGEF33A8MVX0 844 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 SLC28A1O00337 649 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 EEF2KO00418 725 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 FBP2O00757 339 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 MLNRO43193 412 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 ECE2O60344 883 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 NOL3O60936 208 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 SCGB2A1O75556 95 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 SORBS2O94875 1100 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 GAS8-AS1O95177 125 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 TRIM16O95361 564 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 IGHV3-13P01766 116 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 PGK2P07205 417 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 HIST1H2AGP0C0S8 130 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 TSPY4P0CV99 314 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 TSPY10P0CW01 314 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 MBL2P11226 248 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 ODC1P11926 461 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 FUT1P19526 365 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 FCARP24071 287 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 ACP1P24666 158 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 LMO2P25791 158 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 CALML3P27482 149 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 MARCKSP29966 332 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 PPP2R1BP30154 601 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 SPRP35270 261 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 NSFP46459 744 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 IFNAR2P48551 515 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 BACE1P56817 501 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 BTG1P62324 171 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 HERV-K104P63124 156 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 CCZ1BP86790 482 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 CCZ1P86791 482 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 PAX8Q06710 450 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 SPP2Q13103 211 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 RIGQ13278 110 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 BTG3Q14201 252 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 RFTN1Q14699 578 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 OR1C1Q15619 314 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 HAGHQ16775 308 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 WSCD2Q2TBF2 565 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 EPC2Q52LR7 807 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 C14orf177Q52M58 125 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 VWA2Q5GFL6 755 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 AGAP7PQ5VUJ5 663 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 IRGCQ6NXR0 463 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 PAQR6Q6TCH4 344 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 CWC27Q6UX04 472 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 ADGRD2Q7Z7M1 963 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 STHQ8IWL8 128 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 OR4N5Q8IXE1 308 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 ZC3H3Q8IXZ2 948 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 BANPQ8N9N5 519 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 AQP11Q8NBQ7 271 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms