RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SLC25A12O75746 678 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PDE9AO76083 593 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 MYO1DO94832 1006 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 WDR47O94967 919 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TBX6O95947 436 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 ENO2P09104 434 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 RNH1P13489 461 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 NCF1P14598 390 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 COX6B1P14854 86 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ZNF37AP17032 561 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 IL10P22301 178 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 JAK1P23458 1154 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 HNRNPH1P31943 449 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 AHRP35869 848 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 MEOX1P50221 254 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 HLCSP50747 726 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 CASP6P55212 293 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 MGAT5Q09328 741 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PDIA2Q13087 525 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 MORF4L2Q15014 288 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PRAMEF9Q5VWM5 478 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 MYO7BQ6PIF6 2116 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 Q6ZPB1 254 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 QSOX2Q6ZRP7 698 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ABHD13Q7L211 337 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 MDGA2Q7Z553 956 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 CLNKQ7Z7G1 428 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ZC3HC1Q86WB0 502 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 KIF18BQ86Y91 864 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.79□□□□□ -1.48
NUP88-212ENST00000576708 PDIK1LQ8N165 341 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TBC1D19Q8N5T2 526 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 FAM47BQ8NA70 645 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TMEM178AQ8NBL3 297 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 FBXO36Q8NEA4 188 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TRPV3Q8NET8 790 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 GABPB2Q8TAK5 448 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 AGAP11Q8TF27 550 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ATL1Q8WXF7 558 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ASB15Q8WXK1 588 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 CCT6BQ92526 530 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ANP32BQ92688 251 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 SLCO2A1Q92959 643 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 DACT3Q96B18 629 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 MTFMTQ96DP5 389 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 PDLIM5Q96HC4 596 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 LURAP1Q96LR2 239 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 EGFL8Q99944 293 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 AIF1LQ9BQI0 150 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 NAT9Q9BTE0 207 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 DEFB126Q9BYW3 111 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 FAM129AQ9BZQ8 928 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TRIM8Q9BZR9 551 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 CAB39LQ9H9S4 337 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PELI2Q9HAT8 420 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PNO1Q9NRX1 252 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 ZNF223Q9UK11 482 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 ITGB1BP2Q9UKP3 347 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 FBXW2Q9UKT8 454 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 SNX24Q9Y343 169 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 ASB1Q9Y576 335 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PCDHGB6Q9Y5F9 930 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 CLDN16Q9Y5I7 305 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 CSMD1Q96PZ7 3565 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PDZD2O15018 2839 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 A0A0G2JMM0 328 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 A0A1B0GTH9 108 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 A0A1W2PPB8 328 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 A0A1W2PRS3 328 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 PINLYPA6NC86 204 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 TMEM200CA6NKL6 621 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 KIR3DP1A8MWS1 328 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CXorf49A8MYA2 514 aaPredicted RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 G3V3Y1 287 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 PSMD12O00232 456 aaPredicted RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 CES2O00748 559 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 TAPBPO15533 448 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 PHGDHO43175 533 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 ZSCAN12O43309 604 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ERI3O43414 337 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 PEX1O43933 1283 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 HS6ST1O60243 411 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CDC40O60508 579 aaKnown RBP eCLIP5.78□□□□□ -1.48
NUP88-212ENST00000576708 SH3BGRLO75368 114 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ITGA10O75578 1167 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CLDN14O95500 239 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 SERPINA6P08185 405 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 C1GALT1C1LP0DN25 315 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ABOP16442 354 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ZNF24P17028 368 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ELAVL4P26378 380 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 CFPP27918 469 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 RPL21P46778 160 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 SLC6A12P48065 614 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 HSPA7P48741 367 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CYB561P49447 251 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 SMSP52788 366 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 PLA2G16P53816 162 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ARL4CP56559 192 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 DR1Q01658 176 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms