RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 DLEU7Q6UYE1 221 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 PAQR9Q6ZVX9 377 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 GPALPP1Q8IXQ4 340 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ARMC10Q8N2F6 343 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 OR56A1Q8NGH5 318 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 OR10G6Q8NH81 332 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 TRIM43Q96BQ3 446 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 MRPL15Q9P015 296 aaKnown RBP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 NOX1Q9Y5S8 564 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 A0A0U1RQS6 177 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 C2orf78A6NCI8 922 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 HPGDSO60760 199 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ATXN1LP0C7T5 689 aaKnown RBP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ZNF30P17039 623 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 IDSP22304 550 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 MLLT11Q13015 90 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ATXN7L3Q14CW9 347 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 FAM205BPQ63HN1 556 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 Q6ZVU0 165 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ZNF627Q7L945 461 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 HMGN2P46Q86SG4 172 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 LRRTM3Q86VH5 581 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 TTLQ8NG68 377 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ZNF563Q8TA94 476 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 SCAMP4Q969E2 229 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 SLC35B4Q969S0 331 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ELMOD3Q96FG2 381 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 ZNF354BQ96LW1 612 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 PPA2Q9H2U2 334 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 RETREG1Q9H6L5 497 aa12.53□□□□□ -0.4
PCDHGB3-201ENST00000576222 TCRBV5S2A0A599 114 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 ZBTB42B2RXF5 422 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 PCDHGA12O60330 932 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 MSL3P1P0C860 447 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 GRK6P43250 576 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 GCGRP47871 477 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 PITPNBP48739 271 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 CCL23P55773 120 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 RIPOR3Q96MK2 946 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 OR5M11Q96RB7 305 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 TM9SF2Q99805 663 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 THAP7Q9BT49 309 aaPredicted RBP12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 SLC12A9Q9BXP2 914 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 NIPAL2Q9H841 368 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 PHPT1Q9NRX4 125 aaPredicted RBP12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 LYARQ9NX58 379 aaKnown RBP12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 TAS2R16Q9NYV7 291 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 MED31Q9Y3C7 131 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 CACNG2Q9Y698 323 aa12.52□□□□□ -0.4
PCDHGB3-201ENST00000576222 LRP5O75197 1615 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 MCIDASD6RGH6 385 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ITPKBP27987 946 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 VIPR1P32241 457 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 SCGB2B2Q4G0G5 96 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 CDKL4Q5MAI5 379 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 KDM4DQ6B0I6 523 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 BAIAP2L2Q6UXY1 529 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 QSOX2Q6ZRP7 698 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 BTLAQ7Z6A9 289 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ANKK1Q8NFD2 765 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 GRHL3Q8TE85 626 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ARHGAP39Q9C0H5 1083 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 C11orf54Q9H0W9 315 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR10A4Q9H209 315 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF385DQ9H6B1 395 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 AP1M2Q9Y6Q5 423 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 SMAD9O15198 467 aaKnown RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 POP7O75817 140 aaKnown RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 GJB5O95377 273 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 AGR2O95994 175 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 CD1EP15812 388 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 CD9P21926 228 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 HSD17B2P37059 387 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 EIF2B5Q13144 721 aaKnown RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 STX12Q86Y82 276 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 HOXD1Q9GZZ0 328 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF639Q9UID6 485 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 TEX51A0A1B0GUA7 166 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 LRRC72A6NJI9 287 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 TTC34A8MYJ7 566 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC35G6P0C7Q6 338 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms