RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 SLC35C2Q9NQQ7 365 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 GIMAP4Q9NUV9 329 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 NOP53Q9NZM5 478 aaKnown RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 RALYQ9UKM9 306 aaKnown RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 TP53TG5Q9Y2B4 290 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 WBP11Q9Y2W2 641 aaKnown RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 DDAH2O95865 285 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 PRPS2P11908 318 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 CSNK2A2P19784 350 aaPredicted RBP15.16■□□□□ 0.02
PFN1-203ENST00000574872 HPCAL1P37235 193 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 ASMTP46597 345 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 SOX8P57073 446 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 BIKQ13323 160 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 ZNF267Q14586 743 aaPredicted RBP15.16■□□□□ 0.02
PFN1-203ENST00000574872 LTB4RQ15722 352 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 LINC00696Q6ZRV3 163 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 LRRC25Q8N386 305 aaPredicted RBP15.16■□□□□ 0.02
PFN1-203ENST00000574872 KRTCAP2Q8N6L1 136 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 APCDD1LQ8NCL9 501 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 ADCY4Q8NFM4 1077 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 NUDT8Q8WV74 236 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 PSMF1Q92530 271 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 PPCDCQ96CD2 204 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 VMP1Q96GC9 406 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 ZNF681Q96N22 645 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 OR52B2Q96RD2 323 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 BBS4Q96RK4 519 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 REEP4Q9H6H4 257 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 ZNF552Q9H707 407 aaPredicted RBP15.16■□□□□ 0.02
PFN1-203ENST00000574872 EHD3Q9NZN3 535 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 ZNF223Q9UK11 482 aaPredicted RBP15.16■□□□□ 0.02
PFN1-203ENST00000574872 ERVK-19Q9WJR5 959 aa15.16■□□□□ 0.02
PFN1-203ENST00000574872 IGSF10Q6WRI0 2623 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 DYRK3O43781 588 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 EDF1O60869 148 aaKnown RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 ALDOCP09972 364 aaKnown RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 CT62P0C5K7 136 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 MDH1P40925 334 aaKnown RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 GPR143P51810 404 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 AQP5P55064 265 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 NME5P56597 212 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 AP2B1P63010 937 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 SMU1Q2TAY7 513 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 ZNF385BQ569K4 471 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 C6orf163Q5TEZ5 329 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 AGAP7PQ5VUJ5 663 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 EPGNQ6UW88 154 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 GALNT12Q8IXK2 581 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 CCDC116Q8IYX3 515 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 MORN4Q8NDC4 146 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 C7orf57Q8NEG2 295 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 OR9A2Q8NGT5 310 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 ELP5Q8TE02 316 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 ZNF721Q8TF20 911 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 THAP3Q8WTV1 239 aaPredicted RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 CIDECQ96AQ7 238 aaPredicted RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 SENP5Q96HI0 755 aaPredicted RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 MARK4Q96L34 752 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 AGAP4Q96P64 663 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 BRINP2Q9C0B6 783 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 SEMA4CQ9C0C4 833 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 ADNPQ9H2P0 1102 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 CXorf21Q9HAI6 301 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 ZBTB20Q9HC78 741 aaPredicted RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 ASIC5Q9NY37 505 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 SH3BP4Q9P0V3 963 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 PCDHGA9Q9Y5G4 932 aaKnown RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 CROCCQ5TZA2 2017 aa15.15■□□□□ 0.02
PFN1-203ENST00000574872 TNRC6AQ8NDV7 1962 aaKnown RBP15.15■□□□□ 0.02
PFN1-203ENST00000574872 SCAMP2O15127 329 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 PRKNO60260 465 aaPredicted RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 MAN1A2O60476 641 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 ALPPP05187 535 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 VIMP08670 466 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 EFNA1P20827 205 aaPredicted RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 NTSP30990 170 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 ST13P50502 369 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 CLCN2P51788 898 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 NCBP2P52298 156 aaKnown RBP eCLIP15.14■□□□□ 0.016e-8■□□□□ 11.2
PFN1-203ENST00000574872 SPRED3Q2MJR0 410 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 LACTB2Q53H82 288 aaPredicted RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 TMEM198Q66K66 360 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 OGFOD2Q6N063 350 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 JMJD6Q6NYC1 403 aaPredicted RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 FAM111BQ6SJ93 734 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 OR7A2PQ8NGA2 310 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 OR1N1Q8NGS0 311 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 ACTRT2Q8TDY3 377 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 FBXL20Q96IG2 436 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 MAELQ96JY0 434 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 BBC3Q96PG8 261 aaPredicted RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 SMAD5Q99717 465 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 DEFB126Q9BYW3 111 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 NPHS2Q9NP85 383 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 COPS7AQ9UBW8 275 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 TUBD1Q9UJT1 453 aa15.14■□□□□ 0.01
PFN1-203ENST00000574872 PPIEQ9UNP9 301 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 TLN1Q9Y490 2541 aaKnown RBP15.14■□□□□ 0.01
PFN1-203ENST00000574872 BOD1L1Q8NFC6 3051 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms