RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DENND1AQ8TEH3 1009 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ZFAND2BQ8WV99 257 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 RPL36ALQ969Q0 106 aaKnown RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 VOPP1Q96AW1 172 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CCDC114Q96M63 670 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ZNF570Q96NI8 536 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 OR2A14Q96R47 310 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CENPOQ9BU64 300 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 TBC1D10AQ9BXI6 508 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ILKAPQ9H0C8 392 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CYP3A43Q9HB55 503 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 KRCC1Q9NPI7 259 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 MKKSQ9NPJ1 570 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 FBXO8Q9NRD0 319 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 FBXL17Q9UF56 701 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CFAP45Q9UL16 551 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 PADI1Q9ULC6 663 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ERVK-11Q9UQG0 969 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 HS3ST2Q9Y278 367 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 FAM169AQ9Y6X4 670 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 NSD1Q96L73 2696 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ZANQ9Y493 2812 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CUBNO60494 3623 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 HEATR9A2RTY3 570 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 MS4A18H0YCH9 400 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CCL21O00585 134 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 WNT9BO14905 357 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 EIF3DO15371 548 aaKnown RBP eCLIP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ZNHIT1O43257 154 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 SPAG6O75602 509 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 WISP2O76076 250 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 PLEKP08567 350 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CD1EP15812 388 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ITGA3P26006 1051 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 GCH1P30793 250 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 COMPP49747 757 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 IST1P53990 364 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 SNX16P57768 344 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 KRT83P78385 493 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ZBED6P86452 979 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ROR2Q01974 943 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 BST2Q10589 180 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ART3Q13508 389 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 TRA2AQ13595 282 aaKnown RBP eCLIP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ALCAMQ13740 583 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 KLF9Q13886 244 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ZNF630Q2M218 657 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ODF3L2Q3SX64 289 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ZNF805Q5CZA5 627 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 RABGAP1LQ5R372 815 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ARHGAP17Q68EM7 881 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 KIAA0930Q6ICG6 404 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 DOK6Q6PKX4 331 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 LRRC31Q6UY01 552 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CERS6Q6ZMG9 384 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 Q6ZSV7 163 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 STXBP4Q6ZWJ1 553 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 MARK2Q7KZI7 788 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 MON1BQ7L1V2 547 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ATP6V0D2Q8N8Y2 350 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 MSANTD4Q8NCY6 345 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 TRIM58Q8NG06 486 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 OR56A4Q8NGH8 313 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ARRDC2Q8TBH0 407 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 GRHL3Q8TE85 626 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 C17orf50Q8WW18 174 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 TAF4BQ92750 862 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ERGIC1Q969X5 290 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 SLC25A28Q96A46 364 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 RRNAD1Q96FB5 475 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 BTN2A3PQ96KV6 586 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 GDAP1L1Q96MZ0 367 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ALS2CR12Q96Q35 445 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 NAP1L3Q99457 506 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 BPIFA3Q9BQP9 254 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 TRIM7Q9C029 511 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 SPRTNQ9H040 489 aaPredicted RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 LIME1Q9H400 295 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CLSTN2Q9H4D0 955 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 ESRP2Q9H6T0 727 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CLK4Q9HAZ1 481 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 LHX9Q9NQ69 397 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 CNGB3Q9NQW8 809 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 GPR83Q9NYM4 423 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 HOOK1Q9UJC3 728 aaKnown RBP5.05□□□□□ -1.6
SF3B3-214ENST00000572365 RPS6KA6Q9UK32 745 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 MAU2Q9Y6X3 613 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 HCFC1P51610 2035 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 MXRA5Q9NR99 2828 aa5.05□□□□□ -1.6
SF3B3-214ENST00000572365 TRGV8A0A0C4DH27 118 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 A0A0U1RQS6 177 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 TMEM110-MUSTN1A8MSY1 372 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 H3BQV1 296 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 M0QYV0 167 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 PLOD3O60568 738 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ALOX12BO75342 701 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 DAB1O75553 588 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 PIGNO95427 931 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 FTCDO95954 541 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CD160O95971 181 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms