RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 ALOX15P16050 662 aaPredicted RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 DDCP20711 480 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 DCTP40126 519 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 MDH1P40925 334 aaKnown RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 STT3AP46977 705 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 FOXL2P58012 376 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 IRX1P78414 480 aaPredicted RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 FOLH1Q04609 750 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 PCOLCEQ15113 449 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 PLAG1Q6DJT9 500 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 FAAH2Q6GMR7 532 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 FAM71E1Q6IPT2 247 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 LARP4Q71RC2 724 aaKnown RBP eCLIP19.25■□□□□ 0.67
VPS53-210ENST00000571456 R3HCC1LQ7Z5L2 792 aaKnown RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 NATD1Q8N6N6 113 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 TEX19Q8NA77 164 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 GALNT11Q8NCW6 608 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 ACTRT2Q8TDY3 377 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 MAELQ96JY0 434 aaKnown RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 ART5Q96L15 291 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 EBPLQ9BY08 206 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 ING2Q9H160 280 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 AKTIPQ9H8T0 292 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 MIEF1Q9NQG6 463 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 MARCOQ9UEW3 520 aaPredicted RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 PPIEQ9UNP9 301 aaKnown RBP19.25■□□□□ 0.67
VPS53-210ENST00000571456 TP53TG5Q9Y2B4 290 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 CLDN16Q9Y5I7 305 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 USH1CQ9Y6N9 552 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 ZNF780BQ9Y6R6 833 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 SAGE2PA6NJ88 616 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 FGF17O60258 216 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 EDF1O60869 148 aaKnown RBP19.24■□□□□ 0.67
VPS53-210ENST00000571456 LDB3O75112 727 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 SEMA7AO75326 666 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 JUNP05412 331 aaKnown RBP19.24■□□□□ 0.67
VPS53-210ENST00000571456 KITP10721 976 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 SDC1P18827 310 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 CSNK2A2P19784 350 aaPredicted RBP19.24■□□□□ 0.67
VPS53-210ENST00000571456 EFNA3P52797 238 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 ATP1A1-AS1Q5TC04 95 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 FAM219BQ5XKK7 198 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 PAPD4Q6PIY7 484 aaKnown RBP19.24■□□□□ 0.67
VPS53-210ENST00000571456 LANCL3Q6ZV70 420 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 SPATA19Q7Z5L4 167 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 KBTBD2Q8IY47 623 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 MORN4Q8NDC4 146 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 CEP70Q8NHQ1 597 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 M1APQ8TC57 530 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 C8orf44Q96CB5 159 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 IMMP1LQ96LU5 166 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 DGAT2Q96PD7 388 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 SLCO1B3Q9NPD5 702 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 CES1P1Q9UKY3 287 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 CLCA3PQ9Y6N3 262 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 SHANK1Q9Y566 2161 aa19.24■□□□□ 0.67
VPS53-210ENST00000571456 ARGFXA6NJG6 315 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 CDK2AP1O14519 115 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 SDHDO14521 159 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 SLITRK5O94991 958 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 IFNA16P05015 189 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 SERPINA7P05543 415 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 BCKDHAP12694 445 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 COL8A1P27658 744 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 EEF1A2Q05639 463 aaKnown RBP19.23■□□□□ 0.67
VPS53-210ENST00000571456 C2orf80Q0P641 193 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 CPZQ66K79 652 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 ACAD11Q709F0 780 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 CLNKQ7Z7G1 428 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 PRPF18Q99633 342 aaKnown RBP19.23■□□□□ 0.67
VPS53-210ENST00000571456 WDR77Q9BQA1 342 aaPredicted RBP19.23■□□□□ 0.67
VPS53-210ENST00000571456 UTS2RQ9UKP6 389 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 PCDHGB7Q9Y5F8 929 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 ZFHX3Q15911 3703 aa19.23■□□□□ 0.67
VPS53-210ENST00000571456 DOCK10Q96BY6 2186 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 OR2W5A6NFC9 320 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 TCP11X1B4DZS4 312 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 PGRMC2O15173 223 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 CPMP14384 443 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 PORP16435 677 aaPredicted RBP19.22■□□□□ 0.67
VPS53-210ENST00000571456 PRPS1L1P21108 318 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 HPCAL1P37235 193 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 ALDH9A1P49189 494 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 XKP51811 444 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 C21orf58P58505 322 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 CEBPEQ15744 281 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 SPRED3Q2MJR0 410 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 C6orf163Q5TEZ5 329 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 IL23RQ5VWK5 629 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 EPGNQ6UW88 154 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 MAMDC2Q7Z304 686 aaPredicted RBP19.22■□□□□ 0.67
VPS53-210ENST00000571456 HPS6Q86YV9 775 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 TMEM151BQ8IW70 566 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 SHISA5Q8N114 240 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 GALNT16Q8N428 558 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 B3GNT7Q8NFL0 401 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 KLHL29Q96CT2 875 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 LHPPQ9H008 270 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 REEP4Q9H6H4 257 aa19.22■□□□□ 0.67
VPS53-210ENST00000571456 ZNF160Q9HCG1 818 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms