RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ADPRMQ3LIE5 342 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 TRIM40Q6P9F5 258 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 ABHD17CQ6PCB6 329 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 ZNF704Q6ZNC4 412 aaPredicted RBP9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 DNM1P46Q6ZS02 220 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 PEX26Q7Z412 305 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 PACS2Q86VP3 889 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 CNGA4Q8IV77 575 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 OR4N5Q8IXE1 308 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 ZNF611Q8N823 705 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 GPATCH11Q8N954 259 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 SPPL2AQ8TCT8 520 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 UCN3Q969E3 161 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 PPWD1Q96BP3 646 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 ZNF669Q96BR6 464 aaPredicted RBP9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 NDNQ99608 321 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 MAPKAP1Q9BPZ7 522 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 TSGA10Q9BZW7 698 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 REXO4Q9GZR2 422 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 OPN3Q9H1Y3 402 aaPredicted RBP9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 PRDM7Q9NQW5 492 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 LAMP3Q9UQV4 416 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 SLC22A14Q9Y267 594 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 MAD1L1Q9Y6D9 718 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 FREM1Q5H8C1 2179 aa9.47□□□□□ -0.89
CTDNEP1-202ENST00000570380 ZCWPW2A0A1B0GU75 182 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 AKR1B15C9JRZ8 316 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 GOLGA6L22H0YM25 854 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 C16orf97H3BN30 126 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 OVOL3O00110 214 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 TP53I11O14683 189 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 HS3ST1O14792 307 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 FGF17O60258 216 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 SIX3O95343 332 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 THBDP07204 575 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 COX7A2P14406 83 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 POU2F1P14859 743 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 CHMP24386 653 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 THBS2P35442 1172 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 ACVR1BP36896 505 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 CASP3P42574 277 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 OCRLQ01968 901 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 RPS6KA2Q15349 733 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCTD19Q17RG1 926 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 C6orf52Q5T4I8 152 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 ANKRD34AQ69YU3 496 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 TIGD3Q6B0B8 471 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 CASC4Q6P4E1 433 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMIGD1Q6UXZ0 262 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLC29A4Q7RTT9 530 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 VN1R5Q7Z5H4 357 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 CAND1Q86VP6 1230 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 ROBO4Q8WZ75 1007 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 CTHRC1Q96CG8 243 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 PGM2Q96G03 612 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMEM41AQ96HV5 264 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 FBXL20Q96IG2 436 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 ART5Q96L15 291 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 DGAT2Q96PD7 388 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 BEX2Q9BXY8 128 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 TRIM54Q9BYV2 358 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 FRMD8P1Q9BZ68 369 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 PLA2G12AQ9BZM1 189 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 WWTR1Q9GZV5 400 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 LACRTQ9GZZ8 138 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 COPS7BQ9H9Q2 264 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 LRTM1Q9HBL6 345 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 LYRM4Q9HD34 91 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 RYDENQ9NUL5 291 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 TEX10Q9NXF1 929 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 ELOVL5Q9NYP7 299 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 FBXO5Q9UKT4 447 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 DTX4Q9Y2E6 619 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCNE2Q9Y6J6 123 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 MEGF8Q7Z7M0 2845 aa9.46□□□□□ -0.9
CTDNEP1-202ENST00000570380 SYCE3A1L190 88 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 PABPN1LA6NDY0 278 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 FRG2CA6NGY1 282 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 MIF4GDA9UHW6 222 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 PLOD2O00469 737 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 CBFA2T2O43439 604 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 SPRY1O43609 319 aaPredicted RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 ADAM11O75078 769 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 H2AFYO75367 372 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 CLEC3AO75596 197 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 FTCDO95954 541 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 C1GALT1C1LP0DN25 315 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TPSB2P20231 275 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 STARP49675 285 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 PGGT1BP53609 377 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 CDKN2DP55273 166 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 RPS4XP62701 263 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 HERVK_113P63132 956 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 ERVK-8P63133 956 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TBX2Q13207 712 aaPredicted RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 EBPQ15125 230 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TPSAB1Q15661 275 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 BEX5Q5H9J7 111 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms