RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SLC6A13Q9NSD5 602 aa14.47□□□□□ -0.09
HERPUD1-219ENST00000570273 SNX8Q9Y5X2 465 aa14.47□□□□□ -0.09
HERPUD1-219ENST00000570273 C15orf38-AP3S2A0A0A6YYH1 394 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 ALBP02768 609 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 ZGLP1P0C6A0 271 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 RBMS1P29558 406 aaKnown RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 IGLV3-21P80748 117 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 RHAGQ02094 409 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 SERTAD2Q14140 314 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 LTB4RQ15722 352 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 NKG7Q16617 165 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 FAM199XQ6PEV8 388 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 ARPINQ7Z6K5 226 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 GOT1L1Q8NHS2 421 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 TSLPQ969D9 159 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 DGAT2Q96PD7 388 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 HOPXQ9BPY8 73 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 ALOXE3Q9BYJ1 711 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 B3GNT4Q9C0J1 378 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 VN1R1Q9GZP7 353 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 SLC26A1Q9H2B4 701 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 CXorf36Q9H7Y0 433 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 AKIRIN1Q9H9L7 192 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 NECTIN3Q9NQS3 549 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 SLC25A37Q9NYZ2 338 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 VAPAQ9P0L0 249 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 MKL2Q9ULH7 1088 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 PCDHB14Q9Y5E9 798 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 PCDHGA7Q9Y5G6 932 aa14.46□□□□□ -0.09
HERPUD1-219ENST00000570273 TRBV5-3A0A0A0MS03 114 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 RNF103-CHMP3A0A140T963 221 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 CNOT3O75175 753 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 HEXBP07686 556 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 CCNYL3P0C7X3 344 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 ZCCHC18P0CG32 403 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 SLC35E2P0CK97 266 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 HOXB9P17482 250 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 NT5EP21589 574 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 PTPN6P29350 595 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 SLC7A2P52569 658 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 FOXL2P58012 376 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 NCF4Q15080 339 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 C6orf163Q5TEZ5 329 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 MRPL14Q6P1L8 145 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 C8orf82Q6P1X6 216 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 BNC2Q6ZN30 1099 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 SZRD1Q7Z422 152 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 ESX1Q8N693 406 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 OR5AK3PQ8NH89 298 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 MCUR1Q96AQ8 359 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 AURKBQ96GD4 344 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 GPATCH1Q9BRR8 931 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 PELOQ9BRX2 385 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 SPAG4Q9NPE6 437 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 SEMA3GQ9NS98 782 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 SIRT3Q9NTG7 399 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 NXT1Q9UKK6 140 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 ACSL6Q9UKU0 697 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 PADI1Q9ULC6 663 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 NEUROG3Q9Y4Z2 214 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 FER1L5A0AVI2 2057 aa14.45□□□□□ -0.1
HERPUD1-219ENST00000570273 IGKV3D-11A0A0A0MRZ8 115 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 VSTM2BA6NLU5 285 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 DNAJC8O75937 253 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 IFNA16P05015 189 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ATP1B1P05026 303 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 UQCRC2P22695 453 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 SLC5A2P31639 672 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 CHI3L1P36222 383 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 MC3RP41968 323 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 STT3AP46977 705 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 MTPNP58546 118 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ASRGL1Q7L266 308 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 TIPARPQ7Z3E1 657 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 LAPTM4BQ86VI4 370 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ST13P4Q8IZP2 240 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 CLEC4FQ8N1N0 589 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ADCY4Q8NFM4 1077 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 PSMA8Q8TAA3 256 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 KAT2AQ92830 837 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 PPWD1Q96BP3 646 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 MAGED4Q96JG8 741 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ANKRD27Q96NW4 1050 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 SPSB2Q99619 263 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 CPPED1Q9BRF8 314 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 SLC35A5Q9BS91 424 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 CRB3Q9BUF7 120 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 TRIM8Q9BZR9 551 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 SPRY4Q9C004 299 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 TRIM4Q9C037 500 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 WDR54Q9H977 334 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ADA2Q9NZK5 511 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 C3orf18Q9UK00 162 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 ERVK-11Q9UQG0 969 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 L3MBTL1Q9Y468 752 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 CLDN16Q9Y5I7 305 aa14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-219ENST00000570273 SYNDIG1LA6NDD5 238 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms