RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	CCNT2	O60583	730 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	SCEL	O95171	688 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	PCNA	P12004	261 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	ALOX15	P16050	662 aa	Predicted RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	EPOR	P19235	508 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	OPRM1	P35372	400 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	MASP1	P48740	699 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	CDK9	P50750	372 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	FBXW4	P57775	412 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	IRF8	Q02556	426 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	FOXF2	Q12947	444 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	CHIT1	Q13231	466 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	SLAMF1	Q13291	335 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	LAPTM5	Q13571	262 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	ZNF267	Q14586	743 aa	Predicted RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	EBP	Q15125	230 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	TOMM20	Q15388	145 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	NTRK2	Q16620	822 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	PDK4	Q16654	411 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	EIPR1	Q53HC9	387 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	PAGE2B	Q5JRK9	111 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195		Q5PR19	223 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	DCST1	Q5T197	706 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	STEAP4	Q687X5	459 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	C18orf63	Q68DL7	685 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	VASN	Q6EMK4	673 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	RNF111	Q6ZNA4	994 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	LUZP2	Q86TE4	346 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	CXorf67	Q86X51	503 aa	Predicted RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	GPSM1	Q86YR5	675 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	ANKMY2	Q8IV38	441 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	P3H2	Q8IVL5	708 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	DND1	Q8IYX4	353 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	PDIK1L	Q8N165	341 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	CIART	Q8N365	385 aa	Predicted RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	TCAIM	Q8N3R3	496 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	RNF175	Q8N4F7	328 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	C9orf106	Q8NAJ2	232 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	ZNF473	Q8WTR7	871 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	WDR34	Q96EX3	536 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	WDYHV1	Q96HA8	205 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	VPS39	Q96JC1	886 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	RILP	Q96NA2	401 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	GNRHR2	Q96P88	292 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	NAP1L3	Q99457	506 aa	Predicted RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	RBM24	Q9BX46	236 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	UGT2B28	Q9BY64	529 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	WWTR1	Q9GZV5	400 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	CNOT10	Q9H9A5	744 aa	Known RBP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	JKAMP	Q9P055	326 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	CSPG4	Q6UVK1	2322 aa		10.07	□□□□□ -0.8
CMC2-223	ENST00000570195	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	MBD3L3	A6NE82	208 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	WASHC1	A8K0Z3	465 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	FAM171A2	A8MVW0	826 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195		H7C1Q1	480 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TP53I11	O14683	189 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	SMAD7	O15105	426 aa	Known RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	ARHGEF9	O43307	516 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	OR10H2	O60403	315 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	HPN	P05981	417 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	BMP7	P18075	431 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	GGT5	P36269	586 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	RPL21	P46778	160 aa	Known RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	SLC12A2	P55011	1212 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	SLC37A1	P57057	533 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	MGAT5	Q09328	741 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	DDX39B	Q13838	428 aa	Known RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.06	□□□□□ -0.8	1e-7	■■■□□ 17.9
CMC2-223	ENST00000570195	TMEM35A	Q53FP2	167 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TBCEL	Q5QJ74	424 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	FNDC7	Q5VTL7	733 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	ST13P4	Q8IZP2	240 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TAGAP	Q8N103	731 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	LRRN4CL	Q8ND94	238 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	C7orf57	Q8NEG2	295 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	EXT2	Q93063	718 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	COX4I2	Q96KJ9	171 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	DERL2	Q9GZP9	239 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	DDX47	Q9H0S4	455 aa	Known RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	OR51B5	Q9H339	312 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	UBQLN3	Q9H347	655 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	CAB39L	Q9H9S4	337 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TEX10	Q9NXF1	929 aa	Predicted RBP	10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	GALNT8	Q9NY28	637 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	CD274	Q9NZQ7	290 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	C15orf41	Q9Y2V0	281 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TEX264	Q9Y6I9	313 aa		10.06	□□□□□ -0.8
CMC2-223	ENST00000570195	TLN2	Q9Y4G6	2542 aa		10.05	□□□□□ -0.8
CMC2-223	ENST00000570195	MED12	Q93074	2177 aa		10.05	□□□□□ -0.8
CMC2-223	ENST00000570195	GOLGA6L10	A0A0M3HER8	536 aa		10.05	□□□□□ -0.8
CMC2-223	ENST00000570195	C2orf92	A0A1B0GVN3	265 aa		10.05	□□□□□ -0.8
CMC2-223	ENST00000570195	SH3D21	A4FU49	640 aa		10.05	□□□□□ -0.8
CMC2-223	ENST00000570195	ANKRD33B	A6NCL7	494 aa		10.05	□□□□□ -0.8

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