RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CSRP2Q16527 193 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 NDUFA9Q16795 377 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 AASDHQ4L235 1098 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 TMTC4Q5T4D3 741 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PHF19Q5T6S3 580 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 ANXA8L1Q5VT79 327 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PRAMEF17Q5VTA0 474 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 NANOGP8Q6NSW7 305 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PRMT9Q6P2P2 845 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 ARHGAP22Q7Z5H3 698 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 B3GNT8Q7Z7M8 397 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 SLC15A3Q8IY34 581 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 CA13Q8N1Q1 262 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 FBXW8Q8N3Y1 598 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 TTC29Q8NA56 475 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 OR4A15Q8NGL6 344 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 WDR60Q8WVS4 1066 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 ZNF501Q96CX3 271 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 RNF31Q96EP0 1072 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 ZNF764Q96H86 408 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 HOPXQ9BPY8 73 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 CPPED1Q9BRF8 314 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 NANOGQ9H9S0 305 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 FGF21Q9NSA1 209 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 EHD3Q9NZN3 535 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 KCMF1Q9P0J7 381 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PHF11Q9UIL8 331 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 BTNL2Q9UIR0 455 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PCDHB14Q9Y5E9 798 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 WDR87Q6ZQQ6 2873 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 C15orf38-AP3S2A0A0A6YYH1 394 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 FITM1A5D6W6 292 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 C4orf47A7E2U8 309 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PGRMC2O15173 223 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 GUCY1B2O75343 617 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 NPPAP01160 153 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 GP1BAP07359 652 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 TCN1P20061 433 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 NOS3P29474 1203 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 PTGER1P34995 402 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 MSX2P35548 267 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 BUD31P41223 144 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 NBL1P41271 181 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 HNRNPFP52597 415 aaKnown RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 ITGA1P56199 1179 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 HBA1P69905 142 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 SIM1P81133 766 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 DUSP2Q05923 314 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 SLC14A1Q13336 389 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 GRM7Q14831 915 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 SLC48A1Q6P1K1 146 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 ARPINQ7Z6K5 226 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 CLEC4FQ8N1N0 589 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 TMEM52Q8NDY8 209 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 WFDC12Q8WWY7 111 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 DPYSL5Q9BPU6 564 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 TMPRSS13Q9BYE2 586 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 DENND2DQ9H6A0 471 aaPredicted RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 CCDC86Q9H6F5 360 aaKnown RBP9.42□□□□□ -0.9
GDE1-205ENST00000569899 FANCEQ9HB96 536 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 LYRM4Q9HD34 91 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 HCN3Q9P1Z3 774 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 UTS2RQ9UKP6 389 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 CES1P1Q9UKY3 287 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 USP22Q9UPT9 525 aa9.42□□□□□ -0.9
GDE1-205ENST00000569899 A0A1W2PRB8 838 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 MEGF11A6BM72 1044 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 NVLO15381 856 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 CBFA2T3O75081 653 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 ERAL1O75616 437 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 CIB2O75838 187 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 NSA2O95478 260 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 LMNAP02545 664 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 MSL3P1P0C860 447 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 C8orf89P0DMQ9 161 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 TGM1P22735 817 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 NTSP30990 170 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 SOAT1P35610 550 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 FRKP42685 505 aaPredicted RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 TRPC1P48995 793 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 ERFP50548 548 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 RAB38P57729 211 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 MAT1AQ00266 395 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 HSPB3Q12988 150 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 FAM53BQ14153 422 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 KPNB1Q14974 876 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 C16orf72Q14CZ0 275 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 CLPPQ16740 277 aaPredicted RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 SYT16Q17RD7 645 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 ZNF750Q32MQ0 723 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 CCDC157Q569K6 752 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 RUNDC3AQ59EK9 446 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 SAMD4BQ5PRF9 694 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 C1orf146Q5VVC0 180 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 GARNL3Q5VVW2 1013 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 OR52E8Q6IFG1 317 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 ZNF551Q7Z340 670 aaPredicted RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 GPR155Q7Z3F1 870 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 GPR135Q8IZ08 494 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms