RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 DPP4P27487 766 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 APOBEC1P41238 236 aaKnown RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 GRIA1P42261 906 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 TNFRSF4P43489 277 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 TNFSF10P50591 281 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 THOP1P52888 689 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 GEMP55040 296 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 NLRP11P59045 1033 aaKnown RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 TAS2R38P59533 333 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 HERV-K104P63124 156 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PDE1BQ01064 536 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 LIPEQ05469 1076 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 FGL1Q08830 312 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 BST1Q10588 318 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 FUT7Q11130 342 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 GAGE2BQ13066 116 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 EXOC3L2Q2M3D2 409 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 GAGE2EQ4V326 116 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SYT14P1Q58G82 188 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SPANXN2Q5MJ10 180 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 C10orf120Q5SQS8 335 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PRAMEF5Q5TYX0 476 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SUSD4Q5VX71 490 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PRAMEF6Q5VXH4 476 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 NKAIN2Q5VXU1 208 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SEL1L3Q68CR1 1132 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 ZSCAN25Q6NSZ9 544 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 GAGE2AQ6NT46 116 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 C11orf63Q6NUN7 778 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PLXDC2Q6UX71 529 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PAQR9Q6ZVX9 377 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 COMMD2Q86X83 199 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 TMEM219Q86XT9 240 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 FAM9CQ8IZT9 166 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 GCSAMQ8N6F7 178 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 THAP8Q8NA92 274 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SLC38A9Q8NBW4 561 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 KLHDC9Q8NEP7 349 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 RDM1Q8NG50 284 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 OR10V1Q8NGI7 309 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 UBTD2Q8WUN7 234 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SMPDL3BQ92485 455 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 MCHR2Q969V1 340 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 KIAA1143Q96AT1 154 aaPredicted RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 TSSK2Q96PF2 358 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 CCNL2Q96S94 520 aaPredicted RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 TMEM43Q9BTV4 400 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 KCNN2Q9H2S1 579 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 SLA2Q9H6Q3 261 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 APMAPQ9HDC9 416 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PHPT1Q9NRX4 125 aaPredicted RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 PTTG2Q9NZH5 202 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 GAGE2DQ9UEU5 116 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PSORS1C1Q9UIG5 152 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 FOXJ3Q9UPW0 622 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 TMED7Q9Y3B3 224 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PARD3Q8TEW0 1356 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PDS5AQ29RF7 1337 aaKnown RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 KIF7Q2M1P5 1343 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 TCP11X1B4DZS4 312 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 M0R296 226 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ALOX15BO15296 676 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ZNF264O43296 627 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 RNF13O43567 381 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 SCO2O43819 266 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 DFNA5O60443 496 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 SNX3O60493 162 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 BCAS1O75363 584 aaPredicted RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 TRIM3O75382 744 aaPredicted RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 FGFR1OPO95684 399 aaKnown RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 LGI1O95970 557 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 TROVE2P10155 538 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD9-220ENST00000569794 IRF2P14316 349 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 PAX1P15863 534 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 PRKACBP22694 351 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 BDKRB2P30411 391 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 NF2P35240 595 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 NME3Q13232 169 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 SELPLGQ14242 412 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 TATDN3Q17R31 274 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 GPAT3Q53EU6 434 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ZC2HC1CQ53FD0 456 aaPredicted RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 XKR3Q5GH77 459 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 PIP5KL1Q5T9C9 394 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 LIPKQ5VXJ0 399 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 FRG2Q64ET8 278 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 LCN10Q6JVE6 187 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 KCTD18Q6PI47 426 aaPredicted RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 CDHR3Q6ZTQ4 885 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 SPATA24Q86W54 205 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ECHDC2Q86YB7 292 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 COMMD1Q8N668 190 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 C1orf52Q8N6N3 182 aaKnown RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 PCDH20Q8N6Y1 951 aaKnown RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 TRIML2Q8N7C3 387 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 C17orf47Q8NEP4 570 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 OR9A1PQ8NGU1 263 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 DNAAF4Q8WXU2 420 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 MCUR1Q96AQ8 359 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 C12orf66Q96MD2 445 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms