RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZNF793Q6ZN11 406 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 RPS19BP1Q86WX3 136 aaKnown RBP13.52□□□□□ -0.25
COMMD4-225ENST00000569245 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 BCORP1Q8N888 145 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 TMEM52Q8NDY8 209 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 CEP70Q8NHQ1 597 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 MTFMTQ96DP5 389 aaKnown RBP13.52□□□□□ -0.25
COMMD4-225ENST00000569245 OR52B2Q96RD2 323 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 MAPKAP1Q9BPZ7 522 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 SORBS1Q9BX66 1292 aaKnown RBP13.52□□□□□ -0.25
COMMD4-225ENST00000569245 DEFB126Q9BYW3 111 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 FARSBQ9NSD9 589 aaKnown RBP13.52□□□□□ -0.25
COMMD4-225ENST00000569245 FBXW2Q9UKT8 454 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 PTGDR2Q9Y5Y4 395 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.25
COMMD4-225ENST00000569245 DOCK10Q96BY6 2186 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 GOLGA8QA0A0J9YX86 632 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 MYOCOSA0A1B0GUC4 107 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 GOLGA8OA6NCC3 632 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 GABRR3A8MPY1 467 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 GOLGA8NF8WBI6 632 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 MAN1A2O60476 641 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 CTNSO60931 367 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 CBX6O95503 412 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 TNNI3P19429 210 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 PPP2R1BP30154 601 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 CD96P40200 585 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 TUBA3CQ13748 450 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 SMU1Q2TAY7 513 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 TUBA3EQ6PEY2 450 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 SCIMPQ6UWF3 145 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 B3GNT7Q8NFL0 401 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 OR2T11Q8NH01 316 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 ELP5Q8TE02 316 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 FAR1Q8WVX9 515 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 METTL2AQ96IZ6 378 aaKnown RBP13.51□□□□□ -0.25
COMMD4-225ENST00000569245 PPP1R36Q96LQ0 422 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 PPP3R2Q96LZ3 170 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 RILPQ96NA2 401 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 BARD1Q99728 777 aaKnown RBP13.51□□□□□ -0.25
COMMD4-225ENST00000569245 ALOXE3Q9BYJ1 711 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 AKTIPQ9H8T0 292 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 OLAHQ9NV23 265 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 KCMF1Q9P0J7 381 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 CLCA3PQ9Y6N3 262 aa13.51□□□□□ -0.25
COMMD4-225ENST00000569245 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 ATP6AP2A0A1C7CYW4 349 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 LSM1O15116 133 aaKnown RBP13.5□□□□□ -0.25
COMMD4-225ENST00000569245 ATP6AP2O75787 350 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 RSL1D1O76021 490 aaKnown RBP13.5□□□□□ -0.25
COMMD4-225ENST00000569245 RASAL1O95294 804 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 CD46P15529 392 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 LBPP18428 481 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 TLX1P31314 330 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-225ENST00000569245 CLCN2P51788 898 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 ID2Q02363 134 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 SRSF1Q07955 248 aaKnown RBP eCLIP13.5□□□□□ -0.25
COMMD4-225ENST00000569245 OR1C1Q15619 314 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 INAQ16352 499 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 OGFOD2Q6N063 350 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 CYP20A1Q6UW02 462 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 LGI4Q8N135 537 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 TMEM132CQ8N3T6 1108 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 HORMAD2Q8N7B1 307 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 NFAM1Q8NET5 270 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-225ENST00000569245 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-225ENST00000569245 C5orf34Q96MH7 638 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 HBEGFQ99075 208 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 NPAS2Q99743 824 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 ACPTQ9BZG2 426 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 ADAP2Q9NPF8 381 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 KLHL1Q9NR64 748 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 HEY2Q9UBP5 337 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 TRIM33Q9UPN9 1127 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 HECTD1Q9ULT8 2610 aa13.5□□□□□ -0.25
COMMD4-225ENST00000569245 LRRK2Q5S007 2527 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 BLACEA4D250 179 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SYNDIG1LA6NDD5 238 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 TGFBR3LH3BV60 316 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 PLPP1O14494 284 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 FCHO1O14526 889 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 CCDC22O60826 627 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 LDB3O75112 727 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 DCTN3O75935 186 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SCELO95171 688 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 EDN3P14138 238 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-225ENST00000569245 HMGCS1Q01581 520 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 CUL3Q13618 768 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SERTAD2Q14140 314 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 ELAVL1Q15717 326 aaKnown RBP13.49□□□□□ -0.25
COMMD4-225ENST00000569245 IMPG1Q17R60 797 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 ATP6AP1LQ52LC2 224 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 C6orf136Q5SQH8 315 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 NXNQ6DKJ4 435 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SPINK14Q6IE38 97 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SPATA19Q7Z5L4 167 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms