RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 RCBTB2O95199 551 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 LRATO95237 230 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 ATP5A1P25705 553 aaKnown RBP11.39□□□□□ -0.59
SNX29-207ENST00000568949 GDF5P43026 501 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 PCYT1AP49585 367 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 EEF1A1P68104 462 aaKnown RBP11.39□□□□□ -0.59
SNX29-207ENST00000568949 PLIN5Q00G26 463 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 FOXF2Q12947 444 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 TEDDM1Q5T9Z0 273 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 EEF1A1P5Q5VTE0 462 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 UBE3DQ7Z6J8 389 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 LUZP2Q86TE4 346 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 TAGAPQ8N103 731 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 NKAPQ8N5F7 415 aaKnown RBP11.39□□□□□ -0.59
SNX29-207ENST00000568949 ACOT4Q8N9L9 421 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 RHBDF1Q96CC6 855 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 WDR34Q96EX3 536 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 GAL3ST4Q96RP7 486 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 CCL19Q99731 98 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 TM9SF2Q99805 663 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 NAT9Q9BTE0 207 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 ANGPTL4Q9BY76 406 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 GSX2Q9BZM3 304 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 WWTR1Q9GZV5 400 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 GRPEL1Q9HAV7 217 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 ZNF490Q9ULM2 529 aaPredicted RBP11.39□□□□□ -0.59
SNX29-207ENST00000568949 C15orf41Q9Y2V0 281 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 NPFFR2Q9Y5X5 522 aa11.39□□□□□ -0.59
SNX29-207ENST00000568949 NPEPPSL1A6NEC2 478 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 OR6C76A6NM76 312 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 CTIFO43310 598 aaKnown RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 ACTL6AO96019 429 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 CYP4B1P13584 511 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 CPN1P15169 458 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 HIST1H1TP22492 207 aaPredicted RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 CPN2P22792 545 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 MASP1P48740 699 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 DIO3P55073 304 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 CBLBQ13191 982 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 EBPQ15125 230 aaKnown RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 RPS6KA2Q15349 733 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 SPRED3Q2MJR0 410 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 C18orf21Q32NC0 220 aaPredicted RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 TMEM35AQ53FP2 167 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 EIPR1Q53HC9 387 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 DCST1Q5T197 706 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 FNDC7Q5VTL7 733 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 ADNP2Q6IQ32 1131 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 TTC27Q6P3X3 843 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 RNF111Q6ZNA4 994 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 C20orf204Q6ZNR8 217 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 ADAMTSL2Q86TH1 951 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 OR4N5Q8IXE1 308 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 SPPL2AQ8TCT8 520 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 TP53INP1Q96A56 240 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 PPWD1Q96BP3 646 aaKnown RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 PERPQ96FX8 193 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 CERS2Q96G23 380 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 RILPQ96NA2 401 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 GNRHR2Q96P88 292 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 PELOQ9BRX2 385 aaKnown RBP11.38□□□□□ -0.59
SNX29-207ENST00000568949 EFCAB11Q9BUY7 163 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 ACBD3Q9H3P7 528 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 MS4A12Q9NXJ0 267 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 ROS1P08922 2347 aa11.38□□□□□ -0.59
SNX29-207ENST00000568949 MXRA5Q9NR99 2828 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 HEATR5AQ86XA9 2040 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 A8MXE2 369 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 DEFB108AA8MXU0 73 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 CLGNO14967 610 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 PRAMEF4O60810 478 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 CDH16O75309 829 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 CNOT4O95628 575 aaKnown RBP11.37□□□□□ -0.59
SNX29-207ENST00000568949 ALOX15P16050 662 aaPredicted RBP11.37□□□□□ -0.59
SNX29-207ENST00000568949 GGT5P36269 586 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 MC3RP41968 323 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 SLCO1A2P46721 670 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 NAGLUP54802 743 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 SLC37A1P57057 533 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 HERVK_113P63132 956 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 ERVK-8P63133 956 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 RPP38P78345 283 aaKnown RBP11.37□□□□□ -0.59
SNX29-207ENST00000568949 GAB1Q13480 694 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 LAPTM5Q13571 262 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 TOMM20Q15388 145 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 HIST2H2ACQ16777 129 aaPredicted RBP11.37□□□□□ -0.59
SNX29-207ENST00000568949 AP5B1Q2VPB7 878 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 PAGE2BQ5JRK9 111 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 WIPI1Q5MNZ9 446 aaPredicted RBP11.37□□□□□ -0.59
SNX29-207ENST00000568949 PRAMEF9Q5VWM5 478 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 HIST2H2AA3Q6FI13 130 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 SCIMPQ6UWF3 145 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 FRA10AC1Q70Z53 315 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 ADGRE4PQ86SQ3 457 aa11.37□□□□□ -0.59
SNX29-207ENST00000568949 PPIL6Q8IXY8 311 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms