RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PTGER1P34995 402 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 HPCAL1P37235 193 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 RRADP55042 308 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 MGAT2Q10469 447 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 SF3A3Q12874 501 aaKnown RBP eCLIP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 LTB4RQ15722 352 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 TBR1Q16650 682 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 SPRED3Q2MJR0 410 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 PDCD4Q53EL6 469 aaKnown RBP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 PLAG1Q6DJT9 500 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 CAMKMTQ7Z624 323 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 LRRC25Q8N386 305 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF321PQ8N8H1 164 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 APCDD1LQ8NCL9 501 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 OR7A2PQ8NGA2 310 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 PPCDCQ96CD2 204 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 PELOQ9BRX2 385 aaKnown RBP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 TMEM120AQ9BXJ8 343 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF223Q9UK11 482 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF780BQ9Y6R6 833 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 DOCK10Q96BY6 2186 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 DSPP15924 2871 aaKnown RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 HRKO00198 91 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 OR10H2O60403 315 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 CLPSP04118 112 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 ITGB2P05107 769 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 LAMP1P11279 417 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 IDO1P14902 403 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 DRD4P21917 467 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 FRKP42685 505 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 MRPL19P49406 292 aaKnown RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 NME5P56597 212 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 SOX8P57073 446 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 UFM1P61960 85 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 AIMP2Q13155 320 aaKnown RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 GSTA3Q16772 222 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 PRICKLE4Q2TBC4 344 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 GPR155Q7Z3F1 870 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 R3HCC1LQ7Z5L2 792 aaKnown RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 CCDC116Q8IYX3 515 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 B3GNT7Q8NFL0 401 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 OR14A16Q8NHC5 309 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 M1APQ8TC57 530 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 SLC2A12Q8TD20 617 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 ELP5Q8TE02 316 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 C10orf82Q8WW14 230 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 EXTL1Q92935 676 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 CIDECQ96AQ7 238 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 COQ8BQ96D53 544 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 DPY30Q9C005 99 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF385DQ9H6B1 395 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 CXorf21Q9HAI6 301 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 MMP25Q9NPA2 562 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 SDR39U1Q9NRG7 319 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-222ENST00000568034 MAT2BQ9NZL9 334 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 SH3BP4Q9P0V3 963 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 KLHL14Q9P2G3 628 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 ENTPD4Q9Y227 616 aa16.78■□□□□ 0.28
COMMD4-222ENST00000568034 CEACAM4O75871 244 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 IGKV3-11P04433 115 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 SERPINA7P05543 415 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 COX7A2P14406 83 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 RPL3P39023 403 aaKnown RBP16.77■□□□□ 0.28
COMMD4-222ENST00000568034 ZFP36L2P47974 494 aaKnown RBP16.77■□□□□ 0.28
COMMD4-222ENST00000568034 WNT3P56703 355 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 EXT1Q16394 746 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 BTBD16Q32M84 506 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 LINC00303Q3SY05 128 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF628Q5EBL2 1059 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 BORAQ6PGQ7 559 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 SAMD14Q8IZD0 417 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-222ENST00000568034 FAM9CQ8IZT9 166 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 KIF2BQ8N4N8 673 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 MORN4Q8NDC4 146 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 OR9A2Q8NGT5 310 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF721Q8TF20 911 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 APOBEC4Q8WW27 367 aaKnown RBP16.77■□□□□ 0.28
COMMD4-222ENST00000568034 PSMF1Q92530 271 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 TTC9Q92623 222 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 DAZLQ92904 295 aaKnown RBP16.77■□□□□ 0.28
COMMD4-222ENST00000568034 NCLNQ969V3 563 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 TESCQ96BS2 214 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 CTHRC1Q96CG8 243 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 RBM18Q96H35 190 aaKnown RBP16.77■□□□□ 0.28
COMMD4-222ENST00000568034 AMDHD1Q96NU7 426 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 SEMA4CQ9C0C4 833 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 GLIPR2Q9H4G4 154 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 CLMPQ9H6B4 373 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 ATP13A2Q9NQ11 1180 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 GIMAP4Q9NUV9 329 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 CLCA3PQ9Y6N3 262 aa16.77■□□□□ 0.28
COMMD4-222ENST00000568034 GMNCA6NCL1 334 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 C9JVG2 144 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 PDPK1O15530 556 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ITGAMP11215 1152 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 PCSK2P16519 638 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 TNNI3P19429 210 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 S1PR1P21453 382 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 NT5EP21589 574 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms