RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SERPINI1Q99574 410 aa25.52■■□□□ 1.68
UBFD1-206ENST00000566669 CNPPD1Q9BV87 410 aa25.52■■□□□ 1.68
UBFD1-206ENST00000566669 TSPYL1Q9H0U9 437 aa25.52■■□□□ 1.68
UBFD1-206ENST00000566669 EXO5Q9H790 373 aa25.52■■□□□ 1.68
UBFD1-206ENST00000566669 ACKR4Q9NPB9 350 aa25.52■■□□□ 1.68
UBFD1-206ENST00000566669 NPDC1Q9NQX5 325 aaPredicted RBP25.52■■□□□ 1.68
UBFD1-206ENST00000566669 ASB4Q9Y574 426 aa25.52■■□□□ 1.68
UBFD1-206ENST00000566669 DNAJC13O75165 2243 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 A0A096LPK6 155 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 A0A0A6YYD5 115 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 ANKRD33BA6NCL7 494 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 ZNF354AO60765 605 aaPredicted RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 TYK2P29597 1187 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 TMED10P49755 219 aaKnown RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 HNRNPH2P55795 449 aaKnown RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 SLC25A35Q3KQZ1 300 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 C18orf63Q68DL7 685 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 OR52E8Q6IFG1 317 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 SPNS3Q6ZMD2 512 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 CCDC71Q8IV32 467 aaPredicted RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 OR5M9Q8NGP3 310 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 TP53INP1Q96A56 240 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 PPWD1Q96BP3 646 aaKnown RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 ZNF559Q9BR84 538 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 SORBS1Q9BX66 1292 aaKnown RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 WWTR1Q9GZV5 400 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 ITGB1BP2Q9UKP3 347 aa25.51■■□□□ 1.67
UBFD1-206ENST00000566669 PHF3Q92576 2039 aaKnown RBP25.51■■□□□ 1.67
UBFD1-206ENST00000566669 NKX2-6A6NCS4 301 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 TP53I11O14683 189 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 CLDN9O95484 217 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 NADKO95544 446 aaPredicted RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 BSGP35613 385 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 SLC37A1P57057 533 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 HERVK_113P63132 956 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 ERVK-8P63133 956 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 CKAP4Q07065 602 aaKnown RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 ZNF267Q14586 743 aaPredicted RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 CPSF6Q16630 551 aaKnown RBP eCLIP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 LRRC25Q8N386 305 aaPredicted RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 RPRMLQ8N4K4 120 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 SECISBP2Q96T21 854 aaKnown RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 ERVK-6Q9BXR3 956 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 ZNF717Q9BY31 904 aaPredicted RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 UCK2Q9BZX2 261 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 ZNF703Q9H7S9 590 aaPredicted RBP25.5■■□□□ 1.67
UBFD1-206ENST00000566669 AHSPQ9NZD4 102 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 ERVK-19Q9WJR5 959 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 LIPGQ9Y5X9 500 aa25.5■■□□□ 1.67
UBFD1-206ENST00000566669 RBP1P09455 135 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 GLI4P10075 376 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 GMPRP36959 345 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 PIGAP37287 484 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 RPP38P78345 283 aaKnown RBP25.49■■□□□ 1.67
UBFD1-206ENST00000566669 EBPQ15125 230 aaKnown RBP25.49■■□□□ 1.67
UBFD1-206ENST00000566669 NTRK2Q16620 822 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 C1orf185Q5T7R7 199 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 LYPD8Q6UX82 237 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 GOLGA7Q7Z5G4 137 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 FAM13CQ8NE31 585 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 WDR20Q8TBZ3 569 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 SREK1Q8WXA9 508 aaKnown RBP25.49■■□□□ 1.67
UBFD1-206ENST00000566669 GAL3ST4Q96RP7 486 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 ADAM29Q9UKF5 820 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 FAM215AQ9Y5M1 114 aa25.49■■□□□ 1.67
UBFD1-206ENST00000566669 CHCHD2Q9Y6H1 151 aaPredicted RBP25.49■■□□□ 1.67
UBFD1-206ENST00000566669 KRTAP10-9P60411 292 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 IRF9Q00978 393 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 SF3B4Q15427 424 aaKnown RBP eCLIP25.48■■□□□ 1.67
UBFD1-206ENST00000566669 RIPPLY2Q5TAB7 128 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 C6orf163Q5TEZ5 329 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 C8orf74Q6P047 294 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 TAOK1Q7L7X3 1001 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 PAGE2Q7Z2X7 111 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 LIX1Q8N485 282 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 ATP6V1E2Q96A05 226 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 ACSS3Q9H6R3 686 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 CPSF2Q9P2I0 782 aaKnown RBP25.48■■□□□ 1.67
UBFD1-206ENST00000566669 TNFRSF10DQ9UBN6 386 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 IKBKGQ9Y6K9 419 aa25.48■■□□□ 1.67
UBFD1-206ENST00000566669 C2orf92A0A1B0GVN3 265 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 A0A1W2PR48 441 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 CDH16O75309 829 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 GUCY1B2O75343 617 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 EEDO75530 441 aaKnown RBP25.47■■□□□ 1.67
UBFD1-206ENST00000566669 SNX4O95219 450 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 PIK3R1P27986 724 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 NRG3P56975 720 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 TESK1Q15569 626 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 HLA-DQA1Q5Y7H0 255 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 ADGRD1Q6QNK2 874 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 RELL1Q8IUW5 271 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 C17orf47Q8NEP4 570 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 NEIL3Q8TAT5 605 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 LRRC46Q96FV0 321 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 ZNF597Q96LX8 424 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 DOHHQ9BU89 302 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 NTMT1Q9BV86 223 aa25.47■■□□□ 1.67
UBFD1-206ENST00000566669 MTRF1LQ9UGC7 380 aaKnown RBP25.47■■□□□ 1.67
UBFD1-206ENST00000566669 HIVEP1P15822 2718 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms