RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 STMN3Q9NZ72 180 aa24.36■■□□□ 1.49
NME3-209ENST00000566600 ABI3Q9P2A4 366 aa24.36■■□□□ 1.49
NME3-209ENST00000566600 BOD1L1Q8NFC6 3051 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 TNRC6AQ8NDV7 1962 aaKnown RBP24.35■■□□□ 1.49
NME3-209ENST00000566600 TRBV11-1A0A0K0K1C0 115 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 VPS4BO75351 444 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 DDAH2O95865 285 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 ASMTP46597 345 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 ACER2Q5QJU3 275 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 B3GNTL1Q67FW5 361 aaPredicted RBP24.35■■□□□ 1.49
NME3-209ENST00000566600 AMER2Q8N7J2 671 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 SENP5Q96HI0 755 aaPredicted RBP24.35■■□□□ 1.49
NME3-209ENST00000566600 RNF32Q9H0A6 362 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 SPTA1P02549 2419 aa24.35■■□□□ 1.49
NME3-209ENST00000566600 DYTNA2CJ06 578 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 CDK2AP1O14519 115 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 ZFAND5O76080 213 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 SDC1P18827 310 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 HK2P52789 917 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 HSDL2Q6YN16 418 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 RPS19BP1Q86WX3 136 aaKnown RBP24.34■■□□□ 1.49
NME3-209ENST00000566600 GALNT12Q8IXK2 581 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 LRRC34Q8IZ02 419 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 FNDC5Q8NAU1 212 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 OR8K3Q8NH51 312 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 CXorf21Q9HAI6 301 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 ZBTB20Q9HC78 741 aaPredicted RBP24.34■■□□□ 1.49
NME3-209ENST00000566600 MED4Q9NPJ6 270 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 TAS2R7Q9NYW3 318 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 ANAPC2Q9UJX6 822 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 ENTPD4Q9Y227 616 aa24.34■■□□□ 1.49
NME3-209ENST00000566600 TRPC5OSA6NMA1 111 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 ATP1B1P05026 303 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 JUNP05412 331 aaKnown RBP24.33■■□□□ 1.49
NME3-209ENST00000566600 BCKDHAP12694 445 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 TACR1P25103 407 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 FEN1P39748 380 aaKnown RBP24.33■■□□□ 1.49
NME3-209ENST00000566600 DGAT2L6Q6ZPD8 337 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 PTRH1Q86Y79 214 aaKnown RBP24.33■■□□□ 1.49
NME3-209ENST00000566600 CRLF3Q8IUI8 442 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 ARMC10Q8N2F6 343 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 LRRC25Q8N386 305 aaPredicted RBP24.33■■□□□ 1.49
NME3-209ENST00000566600 ZNF721Q8TF20 911 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 EXOSC8Q96B26 276 aaKnown RBP24.33■■□□□ 1.49
NME3-209ENST00000566600 NUF2Q9BZD4 464 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 SLC35C2Q9NQQ7 365 aa24.33■■□□□ 1.49
NME3-209ENST00000566600 EIF3LQ9Y262 564 aaKnown RBP24.33■■□□□ 1.49
NME3-209ENST00000566600 HDAC3O15379 428 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 PRB1P04280 392 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 PRPS2P11908 318 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 DDX5P17844 614 aaKnown RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 NT5EP21589 574 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 ARG2P78540 354 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 EMX2Q04743 252 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 ZNF267Q14586 743 aaPredicted RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 TICAM1Q8IUC6 712 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 ZNF843Q8N446 348 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 RBMXL3Q8N7X1 1067 aaKnown RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 OR5L2Q8NGL0 311 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 HAS2Q92819 552 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 CNRIP1Q96F85 164 aaPredicted RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 ZNF764Q96H86 408 aaPredicted RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 EGLN2Q96KS0 407 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 C7orf26Q96N11 449 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 ZNF681Q96N22 645 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 TSSK3Q96PN8 268 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 CNPPD1Q9BV87 410 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 CDCP1Q9H5V8 836 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 MEAF6Q9HAF1 191 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 GIMAP2Q9UG22 337 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 ZNF223Q9UK11 482 aaPredicted RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 HEMK1Q9Y5R4 338 aaPredicted RBP24.32■■□□□ 1.48
NME3-209ENST00000566600 COL6A6A6NMZ7 2263 aa24.32■■□□□ 1.48
NME3-209ENST00000566600 A0A1W2PS29 197 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 FCHO1O14526 889 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 IGKV3-11P04433 115 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 MPIP34949 423 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 ERVK-8P63133 956 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 ZNF750Q32MQ0 723 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 FCRLBQ6BAA4 426 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 ARFGAP2Q8N6H7 521 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 PIWIL2Q8TC59 973 aaKnown RBP24.31■■□□□ 1.48
NME3-209ENST00000566600 MTERF3Q96E29 417 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 PPP1R36Q96LQ0 422 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 BBS4Q96RK4 519 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 REEP4Q9H6H4 257 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 AKTIPQ9H8T0 292 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 ASIC5Q9NY37 505 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 ERVK-19Q9WJR5 959 aa24.31■■□□□ 1.48
NME3-209ENST00000566600 CPAMD8Q8IZJ3 1885 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 RPL3P39023 403 aaKnown RBP24.3■■□□□ 1.48
NME3-209ENST00000566600 MLF1P58340 268 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 RNF4P78317 190 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 CEBPEQ15744 281 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 IL23RQ5VWK5 629 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 RNF111Q6ZNA4 994 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 R3HCC1LQ7Z5L2 792 aaKnown RBP24.3■■□□□ 1.48
NME3-209ENST00000566600 BEST3Q8N1M1 668 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 LIX1Q8N485 282 aa24.3■■□□□ 1.48
NME3-209ENST00000566600 PNPLA2Q96AD5 504 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms