RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 OR6C2Q9NZP2 312 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PDP1Q9P0J1 537 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 GCNT4Q9P109 453 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF319Q9P2F9 582 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 DBF4Q9UBU7 674 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 EPHA6Q9UF33 1036 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PISDQ9UG56 409 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MIOXQ9UGB7 285 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PACSIN3Q9UKS6 424 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PACSIN2Q9UNF0 486 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PIGLQ9Y2B2 252 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 RNF115Q9Y4L5 304 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 RAI2Q9Y5P3 530 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 FKBP7Q9Y680 259 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TEX14Q8IWB6 1497 aa3.03□□□□□ -1.93
HERPUD1-211ENST00000566550 BAZ1BQ9UIG0 1483 aaKnown RBP3.03□□□□□ -1.93
HERPUD1-211ENST00000566550 NINLQ9Y2I6 1382 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RAPGEF6Q8TEU7 1601 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 LOC105371242A0A075B767 164 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TRAV26-1A0A087WT03 109 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM272A0A1B0GTI8 110 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ATP6AP2A0A1C7CYW4 349 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ACOD1A6NK06 481 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 LRRC30A6NM36 301 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 KRTAP29-1A8MX34 341 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 H0YL77 283 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TEX46H3BTG2 121 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TULP2O00295 520 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ALOX15BO15296 676 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNHIT1O43257 154 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 EML2O95834 649 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TXNDC12O95881 172 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 LGI1O95970 557 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 PEX11BO96011 259 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 OTCP00480 354 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 CHRNA1P02708 482 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 APOHP02749 345 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 MT-ND2P03891 347 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 VTNP04004 478 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 APRTP07741 180 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 FHP07954 510 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM191BP0C7N4 346 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 CCDC172P0C7W6 258 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM106CPP0CH98 169 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 AMD1P17707 334 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 GPX3P22352 226 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 FCARP24071 287 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ACKR3P25106 362 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 HNRNPH3P31942 346 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RFC2P35250 354 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC11A1P49279 550 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 BCAP31P51572 246 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 MAZP56270 477 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 C1QTNF8P60827 252 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ZP1P60852 638 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RPS15P62841 145 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ID2Q02363 134 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 NHLH1Q02575 133 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RELQ04864 619 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 GABPAQ06546 454 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 MFAP5Q13361 173 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 DHX34Q14147 1143 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RBM39Q14498 530 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 PCK2Q16822 640 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ALKBH6Q3KRA9 238 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 DCAF4L1Q3SXM0 396 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 GPR33Q49SQ1 333 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 HIKESHIQ53FT3 197 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ASPRV1Q53RT3 343 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 AGBL2Q5U5Z8 902 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RNASEKQ6P5S7 137 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TRIM65Q6PJ69 517 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 DOK6Q6PKX4 331 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 DHRS11Q6UWP2 260 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 CENPQQ7L2Z9 268 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 BHLHA9Q7RTU4 235 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TRPM8Q7Z2W7 1104 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 COX8CQ7Z4L0 72 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 GOLGA7Q7Z5G4 137 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 GLCCI1Q86VQ1 547 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 WDR49Q8IV35 697 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 CCDC60Q8IWA6 550 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ADHFE1Q8IWW8 467 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 COMMD1Q8N668 190 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM99Q8N816 258 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 C7orf57Q8NEG2 295 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 STXBP6Q8NFX7 210 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 OR1J1Q8NGS3 322 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 LILRB4Q8NHJ6 448 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SPRYD4Q8WW59 207 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ASB5Q8WWX0 329 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 IGFBPL1Q8WX77 278 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SUSD6Q92537 303 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC35C1Q96A29 364 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 C11orf24Q96F05 449 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 PCED1BQ96HM7 432 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 NSL1Q96IY1 281 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 AKR1E2Q96JD6 320 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 AMDHD1Q96NU7 426 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 CASD1Q96PB1 797 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms