RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SPACA9Q96E40 222 aaPredicted RBP18.63■□□□□ 0.57
CLN6-207ENST00000566347 MRPL57Q9BQC6 102 aaKnown RBP18.63■□□□□ 0.57
CLN6-207ENST00000566347 ERVK-6Q9BXR3 956 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 TRIM8Q9BZR9 551 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 AHSPQ9NZD4 102 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 ERVK-19Q9WJR5 959 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 HRH3Q9Y5N1 445 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 A0A087WUV0 522 aaPredicted RBP18.62■□□□□ 0.57
CLN6-207ENST00000566347 GLOD5A6NK44 160 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 POC1B-GALNT4F8VUJ3 575 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 BCKDKO14874 412 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 NADKO95544 446 aaPredicted RBP18.62■□□□□ 0.57
CLN6-207ENST00000566347 AIFM1O95831 613 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 IGHG3P01860 377 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 CTAGE8P0CG41 777 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 SLC35E2P0CK97 266 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 DNASE1L1P49184 302 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 FOXO1Q12778 655 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 TRAF3Q13114 568 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 GGTA1PQ4G0N0 100 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 PAGE2Q7Z2X7 111 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 CTAGE4Q8IX94 777 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 MARVELD2Q8N4S9 558 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 PAQR8Q8TEZ7 354 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 RND1Q92730 232 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 GAL3ST4Q96RP7 486 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 SPOCK3Q9BQ16 436 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 MRPL46Q9H2W6 279 aaKnown RBP18.62■□□□□ 0.57
CLN6-207ENST00000566347 SH2D2AQ9NP31 389 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 ADAM29Q9UKF5 820 aa18.62■□□□□ 0.57
CLN6-207ENST00000566347 CSMD1Q96PZ7 3565 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 A0A1B0GVC2 190 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 NPIPA2E9PIF3 369 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 NPIPA3F8WFD2 350 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 PIK3R1P27986 724 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 SERPINB3P29508 390 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 ECHS1P30084 290 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 SSTR2P30874 369 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 MAGEA5P43359 124 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 KIR3DL1P43629 444 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 SLC37A1P57057 533 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 EMC4Q5J8M3 183 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 ACAD11Q709F0 780 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 TRILQ7L0X0 811 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 DCAKDQ8WVC6 231 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 SMC6Q96SB8 1091 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 WWTR1Q9GZV5 400 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 ELOVL6Q9H5J4 265 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 ZBTB26Q9HCK0 441 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 TUBA8Q9NY65 449 aaPredicted RBP18.61■□□□□ 0.57
CLN6-207ENST00000566347 CNIH4Q9P003 139 aa18.61■□□□□ 0.57
CLN6-207ENST00000566347 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
CLN6-207ENST00000566347 PHF3Q92576 2039 aaKnown RBP18.61■□□□□ 0.57
CLN6-207ENST00000566347 WASHC1A8K0Z3 465 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 TRIM49D1C9J1S8 452 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 SUSD5O60279 629 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 GBAP04062 536 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 RPS17P08708 135 aaKnown RBP18.6■□□□□ 0.57
CLN6-207ENST00000566347 FBXO45P0C2W1 286 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 CHRNB4P30926 498 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 NR0B1P51843 470 aaKnown RBP18.6■□□□□ 0.57
CLN6-207ENST00000566347 SLC10A1Q14973 349 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 EBPQ15125 230 aaKnown RBP18.6■□□□□ 0.57
CLN6-207ENST00000566347 GXYLT1Q4G148 440 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 LGSNQ5TDP6 509 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 LYPD8Q6UX82 237 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 MILR1Q7Z6M3 343 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 TAGAPQ8N103 731 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 FBXW8Q8N3Y1 598 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 MYRIPQ8NFW9 859 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 NSUN5Q96P11 429 aaKnown RBP18.6■□□□□ 0.57
CLN6-207ENST00000566347 SEMA4BQ9NPR2 832 aaPredicted RBP18.6■□□□□ 0.57
CLN6-207ENST00000566347 BOKQ9UMX3 212 aaPredicted RBP18.6■□□□□ 0.57
CLN6-207ENST00000566347 TACC2O95359 2948 aa18.6■□□□□ 0.57
CLN6-207ENST00000566347 FIGNL2A6NMB9 653 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 AQP7O14520 342 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 PGRMC2O15173 223 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 OTCP00480 354 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 KLK1P06870 262 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 SNRPAP09012 282 aaKnown RBP18.59■□□□□ 0.57
CLN6-207ENST00000566347 PIGAP37287 484 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 KCNJ2P63252 427 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 ADGRD1Q6QNK2 874 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 GALNT12Q8IXK2 581 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 ACBD4Q8NC06 268 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 FAM13CQ8NE31 585 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 OR4F6Q8NGB9 312 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 OR4K14Q8NGD5 310 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 OR5M3Q8NGP4 307 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 LILRB4Q8NHJ6 448 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 DOK4Q8TEW6 326 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 LURAP1Q96LR2 239 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 MRPL1Q9BYD6 325 aaKnown RBP18.59■□□□□ 0.57
CLN6-207ENST00000566347 ENKD1Q9H0I2 346 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 LDAHQ9H6V9 325 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 CXorf21Q9HAI6 301 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 PNPLA3Q9NST1 481 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 TEX10Q9NXF1 929 aaPredicted RBP18.59■□□□□ 0.57
CLN6-207ENST00000566347 RNF6Q9Y252 685 aa18.59■□□□□ 0.57
CLN6-207ENST00000566347 LIPGQ9Y5X9 500 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms