RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 BMP8AQ7Z5Y6 402 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 MBD3L2Q8NHZ7 208 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 EBF4Q9BQW3 602 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 SLC39A8Q9C0K1 460 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CAB39LQ9H9S4 337 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 EBF2Q9HAK2 575 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 DDX28Q9NUL7 540 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PPIL1Q9Y3C6 166 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 DFFAO00273 331 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 TRAFD1O14545 582 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PLIN3O60664 434 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 VPS26AO75436 327 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PRKCGP05129 697 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 SERPINF2P08697 491 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 OR4Q2P0C623 313 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 G6PDP11413 515 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 FGF3P11487 239 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CD1BP29016 333 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 TYK2P29597 1187 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 SLC1A6P48664 564 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CD97P48960 835 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PGGT1BP53609 377 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 SELENOVP59797 346 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PPP1R8Q12972 351 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 MRPL10Q7Z7H8 261 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 C10orf107Q8IVU9 208 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 RFKQ969G6 155 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 MYRFLQ96LU7 910 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 ZNF778Q96MU6 729 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 RILPQ96NA2 401 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 MRI1Q9BV20 369 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 HINT2Q9BX68 163 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 GBA3Q9H227 469 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 FAM83DQ9H4H8 585 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CHRAC1Q9NRG0 131 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 BFARQ9NZS9 450 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 TMEM216Q9P0N5 145 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 A4GNTQ9UNA3 340 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 TDRD15B5MCY1 1934 aaKnown RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 BIRC5O15392 142 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 GYG2O15488 501 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CCDC22O60826 627 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 GLRA3O75311 464 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CYBBP04839 570 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ACSM2AQ08AH3 577 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CDONQ4KMG0 1287 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 SPANXN3Q5MJ09 141 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ACSM2BQ68CK6 577 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CYP2R1Q6VVX0 501 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 KYAT3Q6YP21 454 aaKnown RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 LDB1Q86U70 411 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ZSWIM9Q86XI8 627 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TMEFF1Q8IYR6 380 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ACVR1CQ8NER5 493 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CACNG8Q8WXS5 425 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 BTBD10Q9BSF8 475 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 NAT9Q9BTE0 207 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 SPATA16Q9BXB7 569 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CSNK1G1Q9HCP0 422 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 DMAP1Q9NPF5 467 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ZCCHC3Q9NUD5 404 aaKnown RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CLEC5AQ9NY25 188 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 CTSFQ9UBX1 484 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 MUC3AQ02505 3323 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TRBV2A0A0J9YWF9 115 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ZCWPW2A0A1B0GU75 182 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 GLRBP48167 497 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 HCAR3P49019 387 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ANGPT1Q15389 498 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TMEM41BQ5BJD5 291 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TEDDM1Q5T9Z0 273 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 FAM171BQ6P995 826 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 SLCO4C1Q6ZQN7 724 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 QSOX2Q6ZRP7 698 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 ASPGQ86U10 573 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 SPATA22Q8NHS9 363 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 FCGR1BQ92637 280 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 NPAS2Q99743 824 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TLE6Q9H808 572 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TMEM161AQ9NX61 479 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 TAS2R1Q9NYW7 299 aa10.06□□□□□ -0.8
UBFD1-205ENST00000566136 UXTQ9UBK9 157 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 MRPS33Q9Y291 106 aaKnown RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 WBP11Q9Y2W2 641 aaKnown RBP10.06□□□□□ -0.8
UBFD1-205ENST00000566136 PPP6CO00743 305 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 GSC2O15499 205 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 B4GALT3O60512 393 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 FCGR3BO75015 233 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 MOCS2O96007 188 aaPredicted RBP10.05□□□□□ -0.8
UBFD1-205ENST00000566136 LDLRP01130 860 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 BMP4P12644 408 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 NMBRP28336 390 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 ARRB2P32121 409 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 ARPC4P59998 168 aa10.05□□□□□ -0.8
UBFD1-205ENST00000566136 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms