RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SALL1Q9NSC2 1324 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 MEI4A8MW99 385 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 CHEK1O14757 476 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 HTATSF1O43719 755 aaKnown RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 LRP3O75074 770 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 SERPINF2P08697 491 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 FCARP24071 287 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 SFNP31947 248 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 SLC1A6P48664 564 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 RIDAP52758 137 aaKnown RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 RPS4XP62701 263 aaKnown RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 PAX8Q06710 450 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 FASTKQ14296 549 aaKnown RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 SIX1Q15475 284 aaPredicted RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 SNAI3Q3KNW1 292 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 GLIPR1L2Q4G1C9 344 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 C1orf189Q5VU69 101 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 LIPJQ5W064 366 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 ZNF772Q68DY9 489 aaPredicted RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 OR6B2Q6IFH4 312 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 STEAP1BQ6NZ63 245 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 METTL7BQ6UX53 244 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 WDR88Q6ZMY6 472 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 GPRIN3Q6ZVF9 776 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 RPAINQ86UA6 219 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 CATSPER3Q86XQ3 398 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 LINC00518Q8N0U6 118 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 LEMD2Q8NC56 503 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 CHDHQ8NE62 594 aaPredicted RBP3.62□□□□□ -1.83
CHD9-215ENST00000565442 OR1B1Q8NGR6 318 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 C16orf58Q96GQ5 468 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 ATF6BQ99941 703 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 SPXQ9BT56 116 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 NT5DC2Q9H857 520 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 PAK5Q9P286 719 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 DNPEPQ9ULA0 475 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 NUDCQ9Y266 331 aa3.62□□□□□ -1.83
CHD9-215ENST00000565442 A0A0U1RRA0 63 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 PI15O43692 258 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 NME2P1O60361 137 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 SYNGR4O95473 234 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 OR9G9P0C7N8 305 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 KRT5P13647 590 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 CCL11P51671 97 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 STARD6P59095 220 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 RAPSNQ13702 412 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 KLF5Q13887 457 aaPredicted RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 PKN2Q16513 984 aaKnown RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 DDI2Q5TDH0 399 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 HIST2H2AA3Q6FI13 130 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 MFSD7Q6UXD7 560 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 MIER3Q7Z3K6 550 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 NUFIP2Q7Z417 695 aaKnown RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 CCDC71Q8IV32 467 aaPredicted RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 ZNF619Q8N2I2 560 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 ABHD12Q8N2K0 398 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 Q8N377 158 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 ZNF781Q8N8C0 355 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 MAPK1IP1LQ8NDC0 245 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 OR1K1Q8NGR3 316 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 PNPLA2Q96AD5 504 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 COQ7Q99807 217 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 SPAG8Q99932 426 aaPredicted RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 DCTN5Q9BTE1 182 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 SIRPDQ9H106 197 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 JPT2Q9H910 190 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 SP140LQ9H930 580 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 PANK3Q9H999 370 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 HPS4Q9NQG7 708 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 EIF3KQ9UBQ5 218 aaKnown RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 KCNN3Q9UGI6 736 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-215ENST00000565442 MGAT4AQ9UM21 535 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 TDRD15B5MCY1 1934 aaKnown RBP3.61□□□□□ -1.83
CHD9-215ENST00000565442 NPC1L1Q9UHC9 1359 aa3.61□□□□□ -1.83
CHD9-215ENST00000565442 TMEM89A2RUT3 159 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 KRT87PA6NCN2 255 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 CFAP73A6NFT4 308 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 ARHGAP42A6NI28 874 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 SH2D1BO14796 132 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 SEC22BO75396 215 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 HPRP00739 348 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 PGK2P07205 417 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 HIST1H2AGP0C0S8 130 aaPredicted RBP3.6□□□□□ -1.83
CHD9-215ENST00000565442 CCDC192P0DO97 292 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 GNSP15586 552 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 GAP43P17677 238 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 TRIM23P36406 574 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 SLC1A4P43007 532 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 FCHO2Q0JRZ9 810 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 BTG3Q14201 252 aaPredicted RBP3.6□□□□□ -1.83
CHD9-215ENST00000565442 CLPPQ16740 277 aaPredicted RBP3.6□□□□□ -1.83
CHD9-215ENST00000565442 POM121L1PQ3SYA9 428 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 CCDC40Q4G0X9 1142 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 UNC50Q53HI1 259 aa3.6□□□□□ -1.83
CHD9-215ENST00000565442 HERC4Q5GLZ8 1057 aaPredicted RBP3.6□□□□□ -1.83
CHD9-215ENST00000565442 TIPARPQ7Z3E1 657 aaKnown RBP3.6□□□□□ -1.83
CHD9-215ENST00000565442 TAF8Q7Z7C8 310 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms