RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, human

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KARS-204	ENST00000564578	UFM1	P61960	85 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CHAF1B	Q13112	559 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	BIK	Q13323	160 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CCDC116	Q8IYX3	515 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	APCDD1L	Q8NCL9	501 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	DOK4	Q8TEW6	326 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	COQ8B	Q96D53	544 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	MTERF3	Q96E29	417 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	RBM18	Q96H35	190 aa	Known RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	LPAR4	Q99677	370 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	ING2	Q9H160	280 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	PRORY	Q9H606	182 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	KLHL14	Q9P2G3	628 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	PPIE	Q9UNP9	301 aa	Known RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	MAN2B2	Q9Y2E5	1009 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	SAGE2P	A6NJ88	616 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	ARGFX	A6NJG6	315 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	MYO1G	B0I1T2	1018 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	HRK	O00198	91 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	DDAH2	O95865	285 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CELA2A	P08217	269 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CT62	P0C5K7	136 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CSNK2A2	P19784	350 aa	Predicted RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	FRK	P42685	505 aa	Predicted RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	ZFP36L2	P47974	494 aa	Known RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	SLC26A5	P58743	744 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	MGAT2	Q10469	447 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	TERF2	Q15554	542 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	GSTA3	Q16772	222 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	PLAG1	Q6DJT9	500 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	C19orf48	Q6RUI8	117 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CAMKMT	Q7Z624	323 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	C10orf82	Q8WW14	230 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.64	□□□□□ -0.55
KARS-204	ENST00000564578	PPCDC	Q96CD2	204 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CATSPER2	Q96P56	530 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	DGAT2	Q96PD7	388 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	TUBB6	Q9BUF5	446 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CXorf21	Q9HAI6	301 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	SH3BP4	Q9P0V3	963 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	ZNF780B	Q9Y6R6	833 aa		11.64	□□□□□ -0.55
KARS-204	ENST00000564578	CNTRL	Q7Z7A1	2325 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	DOCK10	Q96BY6	2186 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	SYNDIG1L	A6NDD5	238 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	C17orf105	B2RV13	164 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578		C9JVG2	144 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	DNAJB5	O75953	348 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	CD1E	P15812	388 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	GPX3	P22352	226 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	GALNS	P34059	522 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ARFIP2	P53365	341 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	PHC1	P78364	1004 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	PLIN5	Q00G26	463 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	LTB4R	Q15722	352 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	PRICKLE4	Q2TBC4	344 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	APLF	Q8IW19	511 aa	Predicted RBP	11.63	□□□□□ -0.55
KARS-204	ENST00000564578	LRRC25	Q8N386	305 aa	Predicted RBP	11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ZNF321P	Q8N8H1	164 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ADCY4	Q8NFM4	1077 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	OR9I1	Q8NGQ6	314 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	CTHRC1	Q96CG8	243 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	SENP5	Q96HI0	755 aa	Predicted RBP	11.63	□□□□□ -0.55
KARS-204	ENST00000564578	FER1L6-AS2	Q96M78	137 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	RILP	Q96NA2	401 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	AMDHD1	Q96NU7	426 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	DPY30	Q9C005	99 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ZNF385D	Q9H6B1	395 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	CLMP	Q9H6B4	373 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ZNF223	Q9UK11	482 aa	Predicted RBP	11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ERVK-11	Q9UQG0	969 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	COPG1	Q9Y678	874 aa	Known RBP	11.63	□□□□□ -0.55
KARS-204	ENST00000564578	CLCA3P	Q9Y6N3	262 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	ZFYVE26	Q68DK2	2539 aa		11.63	□□□□□ -0.55
KARS-204	ENST00000564578	OR10H2	O60403	315 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	SHOX2	O60902	331 aa	Predicted RBP	11.62	□□□□□ -0.55
KARS-204	ENST00000564578	IGKV3-11	P04433	115 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	COX7A2	P14406	83 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	S1PR1	P21453	382 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	MPI	P34949	423 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	HPCAL1	P37235	193 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	MRPL19	P49406	292 aa	Known RBP	11.62	□□□□□ -0.55
KARS-204	ENST00000564578	WNT3	P56703	355 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	SOX8	P57073	446 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	COL28A1	Q2UY09	1125 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	BTBD16	Q32M84	506 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	PDCD4	Q53EL6	469 aa	Known RBP	11.62	□□□□□ -0.55
KARS-204	ENST00000564578	METTL21C	Q5VZV1	264 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.62	□□□□□ -0.55
KARS-204	ENST00000564578	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.62	□□□□□ -0.55
KARS-204	ENST00000564578	FAM9C	Q8IZT9	166 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	SIMC1	Q8NDZ2	872 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	C7orf57	Q8NEG2	295 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	B3GNT7	Q8NFL0	401 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	ELP5	Q8TE02	316 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	ZNF721	Q8TF20	911 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	PSMF1	Q92530	271 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	DAZL	Q92904	295 aa	Known RBP	11.62	□□□□□ -0.55
KARS-204	ENST00000564578	RIT1	Q92963	219 aa		11.62	□□□□□ -0.55
KARS-204	ENST00000564578	TESC	Q96BS2	214 aa		11.62	□□□□□ -0.55

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