RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 KCNA7Q96RP8 456 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 BARD1Q99728 777 aaKnown RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 TRMOQ9BU70 441 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 TMEM109Q9BVC6 243 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 SHCBP1LQ9BZQ2 653 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 LIN28AQ9H9Z2 209 aaKnown RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 EML4Q9HC35 981 aaKnown RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 RRAGDQ9NQL2 400 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 PFDN4Q9NQP4 134 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 MKS1Q9NXB0 559 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 MCM8Q9UJA3 840 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ZNF223Q9UK11 482 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 RAB21Q9UL25 225 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ERVK-19Q9WJR5 959 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 KLF13Q9Y2Y9 288 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 PCDHA9Q9Y5H5 950 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ZNF780BQ9Y6R6 833 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 WASHC1A8K0Z3 465 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 PCDH7O60245 1069 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 PRKNO60260 465 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-206ENST00000564557 NEURL1O76050 574 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 MYZAPP0CAP1 466 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 UROSP10746 265 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 CHN1P15882 459 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 PORP16435 677 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-206ENST00000564557 GALNSP34059 522 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 HTR6P50406 440 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 PMP22Q01453 160 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 HMGCS1Q01581 520 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 ALDH6A1Q02252 535 aaKnown RBP12.69□□□□□ -0.38
CNOT1-206ENST00000564557 RBPJQ06330 500 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 HEPACAMQ14CZ8 416 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 SPRED3Q2MJR0 410 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 OPN5Q6U736 354 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-206ENST00000564557 GALNT12Q8IXK2 581 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 ARMC10Q8N2F6 343 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 ZNF321PQ8N8H1 164 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 SLC22A8Q8TCC7 542 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 TCP10LQ8TDR4 215 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 CHTF18Q8WVB6 975 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 TM4SF18Q96CE8 201 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 KLHL29Q96CT2 875 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 FBXL20Q96IG2 436 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 GAL3ST4Q96RP7 486 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 HES7Q9BYE0 225 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 ACPTQ9BZG2 426 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 TRIM45Q9H8W5 580 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-206ENST00000564557 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 SEC14L3Q9UDX4 400 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 FIS1Q9Y3D6 152 aa12.69□□□□□ -0.38
CNOT1-206ENST00000564557 UBFD1O14562 309 aaKnown RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 NME2P1O60361 137 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 ANXA4P09525 319 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 CPMP14384 443 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 DRD2P14416 443 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 CSNK2A2P19784 350 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 NME2P22392 152 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 SERPINB3P29508 390 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 GSTM5P46439 218 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 HK2P52789 917 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 SRSF11Q05519 484 aaKnown RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 PCLAFQ15004 111 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 SLC48A1Q6P1K1 146 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 C16orf47Q6ZP98 133 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 CDC26Q8NHZ8 85 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 NUBPLQ8TB37 319 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 DOK4Q8TEW6 326 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 UCN3Q969E3 161 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 SLX1AQ9BQ83 275 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 GATA5Q9BWX5 397 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-206ENST00000564557 BRINP2Q9C0B6 783 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 UTS2RQ9UKP6 389 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 OSGIN2Q9Y236 505 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 DLGAP4Q9Y2H0 992 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 SVILO95425 2214 aa12.68□□□□□ -0.38
CNOT1-206ENST00000564557 SERTM1A2A2V5 107 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 OR6C76A6NM76 312 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 SLC28A1O00337 649 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 AZIN1O14977 448 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 RGS14O43566 566 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 UNC5CO95185 931 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 ALDH3A1P30838 453 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 TIA1P31483 386 aaKnown RBP eCLIP12.67□□□□□ -0.38
CNOT1-206ENST00000564557 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
CNOT1-206ENST00000564557 SOX3P41225 446 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 CASP6P55212 293 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 FOXA1P55317 472 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 ZNF844Q08AG5 666 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 KRTCAP3Q53RY4 240 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 DGAT2L6Q6ZPD8 337 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-206ENST00000564557 TAGAPQ8N103 731 aa12.67□□□□□ -0.38
CNOT1-206ENST00000564557 POGLUT1Q8NBL1 392 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms