RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TAGAPQ8N103 731 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
SPG7-210ENST00000564409 FBXW8Q8N3Y1 598 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 TMEM251Q8N6I4 163 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 MYRIPQ8NFW9 859 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 TP53INP1Q96A56 240 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 PPWD1Q96BP3 646 aaKnown RBP13.85□□□□□ -0.19
SPG7-210ENST00000564409 SARAFQ96BY9 339 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 FRG2BQ96QU4 278 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 SMC6Q96SB8 1091 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 NOL11Q9H8H0 719 aaKnown RBP13.85□□□□□ -0.19
SPG7-210ENST00000564409 KCNJ16Q9NPI9 418 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 ZNF180Q9UJW8 692 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 PCDHGB3Q9Y5G1 929 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 HRH3Q9Y5N1 445 aa13.85□□□□□ -0.19
SPG7-210ENST00000564409 FREM3P0C091 2139 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 A0A0G2JMM0 328 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 A0A1W2PPB8 328 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 A0A1W2PR48 441 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 A0A1W2PRS3 328 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ANKRD33BA6NCL7 494 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 LRRC14BA6NHZ5 514 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 KIR3DP1A8MWS1 328 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 NPIPA2E9PIF3 369 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 NPIPA3F8WFD2 350 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 C19orf84I3L1E1 186 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 TMPRSS11DO60235 418 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ZNF354AO60765 605 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 WDR1O75083 606 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 URI1O94763 535 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 SIX3O95343 332 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 NADKO95544 446 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 FBXO45P0C2W1 286 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 PIK3R1P27986 724 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ARL1P40616 181 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 MAGEA5P43359 124 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 MAN2A2P49641 1150 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 SLC37A1P57057 533 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 HERVK_113P63132 956 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ERVK-8P63133 956 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 IFT88Q13099 833 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ZNF267Q14586 743 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 GGTA1PQ4G0N0 100 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 TBCELQ5QJ74 424 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 RNF175Q8N4F7 328 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 MARVELD2Q8N4S9 558 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 PTGR2Q8N8N7 351 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 OR5M3Q8NGP4 307 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 TRPC4APQ8TEL6 797 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 FMO2Q99518 471 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 MRPL57Q9BQC6 102 aaKnown RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 CNPPD1Q9BV87 410 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ERVK-6Q9BXR3 956 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 WWTR1Q9GZV5 400 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 CDC42EP4Q9H3Q1 356 aaKnown RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 ZFP64Q9NPA5 681 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 TUBA8Q9NY65 449 aaPredicted RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 ERVK-19Q9WJR5 959 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 RNF6Q9Y252 685 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.84□□□□□ -0.19
SPG7-210ENST00000564409 CSMD1Q96PZ7 3565 aa13.84□□□□□ -0.19
SPG7-210ENST00000564409 ARHGAP21Q5T5U3 1957 aa13.83□□□□□ -0.19
SPG7-210ENST00000564409 OR7A17O14581 309 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 TP53I11O14683 189 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 ACSL3O95573 720 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 AIFM1O95831 613 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 GABRA1P14867 456 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 IGFBP2P18065 325 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 DNASE1L1P49184 302 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 TMED10P49755 219 aaKnown RBP13.83□□□□□ -0.2
SPG7-210ENST00000564409 KCNJ2P63252 427 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 PMPCAQ10713 525 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 NTRK2Q16620 822 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 LGSNQ5TDP6 509 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 TTC19Q6DKK2 380 aaPredicted RBP13.83□□□□□ -0.2
SPG7-210ENST00000564409 LYPD8Q6UX82 237 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 MEX3BQ6ZN04 569 aaKnown RBP13.83□□□□□ -0.2
SPG7-210ENST00000564409 DGAT2L6Q6ZPD8 337 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 PLD6Q8N2A8 252 aaKnown RBP13.83□□□□□ -0.2
SPG7-210ENST00000564409 C17orf47Q8NEP4 570 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 OR4K14Q8NGD5 310 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 PHF21BQ96EK2 531 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 SECISBP2Q96T21 854 aaKnown RBP13.83□□□□□ -0.2
SPG7-210ENST00000564409 PAFAH2Q99487 392 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 LDAHQ9H6V9 325 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 CXorf21Q9HAI6 301 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 NMRK1Q9NWW6 199 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 B4GALT7Q9UBV7 327 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 PCTPQ9UKL6 214 aa13.83□□□□□ -0.2
SPG7-210ENST00000564409 A0A087WUV0 522 aaPredicted RBP13.82□□□□□ -0.2
SPG7-210ENST00000564409 GLOD5A6NK44 160 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 G3V3Y1 287 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 HRKO00198 91 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 OTCP00480 354 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 NEK2P51955 445 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 NRG3P56975 720 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 FUT7Q11130 342 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 TRAF3Q13114 568 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 EBPQ15125 230 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms