RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PDLIM2Q96JY6 352 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 FSD1LQ9BXM9 530 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 TMPRSS13Q9BYE2 586 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 LPAR2Q9HBW0 351 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 PCDH18Q9HCL0 1135 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 G6PC2Q9NQR9 355 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 PNO1Q9NRX1 252 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 LIMA1Q9UHB6 759 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 STX7O15400 261 aaKnown RBP9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 CHST10O43529 356 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 PIP5K1CO60331 668 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 DESP17661 470 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 RNF4P78317 190 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 XIAPP98170 497 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 ZP4Q12836 540 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 MAP4K2Q12851 820 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 IFI16Q16666 785 aaKnown RBP9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 FAM182AQ5T1J6 154 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 FOXB2Q5VYV0 432 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 ZNF571Q7Z3V5 609 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 TRIM42Q8IWZ5 723 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 DND1Q8IYX4 353 aaKnown RBP9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC22A15Q8IZD6 547 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 NXNL1Q96CM4 212 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 PALMDQ9NP74 551 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC22A7Q9Y694 548 aa9.38□□□□□ -0.91
HDGFL3-204ENST00000563790 TMCO5BA8MYB1 307 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 HAT1O14929 419 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 SEC14L2O76054 403 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 RNF8O76064 485 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 AP2A2O94973 939 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 NDUFA7O95182 113 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 GZMAP12544 262 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 ZNF708P17019 499 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 PGCP20142 388 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 KHKP50053 298 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC10A2Q12908 348 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 KRT81Q14533 505 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 SYTL3Q4VX76 610 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 BOLA3Q53S33 107 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 NCBP2-AS2Q69YL0 99 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 RBM43Q6ZSC3 357 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 CPNE8Q86YQ8 564 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 PLD3Q8IV08 490 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 ZNF619Q8N2I2 560 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 NIPA2Q8N8Q9 360 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 KCT2Q8NC54 265 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 FAM13CQ8NE31 585 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 NEK11Q8NG66 645 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 OR5L2Q8NGL0 311 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 MAGEC3Q8TD91 643 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 MACROD1Q9BQ69 325 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 HDHD5Q9BXW7 423 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC52A3Q9NQ40 469 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
HDGFL3-204ENST00000563790 AVILO75366 819 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 SNX4O95219 450 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 FTLP02792 175 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 FTH1P02794 183 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 FERP16591 822 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 PPP2R1BP30154 601 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 STARP49675 285 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 GFRA1P56159 465 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 SEMA3AQ14563 771 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 PAFAH1B3Q15102 231 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 TOR1AIP1Q5JTV8 583 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 FIGNL1Q6PIW4 674 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 B3GLCTQ6Y288 498 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 RAB42Q8N4Z0 105 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 CAMKVQ8NCB2 501 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 OR6K3Q8NGY3 331 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 CFAP61Q8NHU2 1237 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 BLOC1S5Q8TDH9 187 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 FIG4Q92562 907 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 RAD51AP1Q96B01 352 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 GPA33Q99795 319 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 ISCUQ9H1K1 167 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 MYO6Q9UM54 1294 aa9.36□□□□□ -0.91
HDGFL3-204ENST00000563790 KCNE1BA0A087WTH5 132 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 LRRC53A6NM62 1247 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 F13BP05160 661 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 FBXO45P0C2W1 286 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 CHRM3P20309 590 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 ITGALP20701 1170 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 IL11P20809 199 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 MASP1P48740 699 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 RELBQ01201 579 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 ASPHQ12797 758 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 ZBTB17Q13105 803 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 RIN1Q13671 783 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 DPYSL3Q14195 570 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 HERC3Q15034 1050 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 PHKG1Q16816 387 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 BBS9Q3SYG4 887 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 SIRPB2Q5JXA9 342 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms