RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 C3orf38Q5JPI3 329 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 CYB5D1Q6P9G0 228 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 SAMD14Q8IZD0 417 aaPredicted RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ZFP28Q8NHY6 868 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 WDR36Q8NI36 951 aaKnown RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ZFP90Q8TF47 636 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 TBC1D20Q96BZ9 403 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 CMKLR1Q99788 373 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 SH3GL1Q99961 368 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 THUMPD3Q9BV44 507 aaKnown RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ALG2Q9H553 416 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 TPT1P8Q9HAU6 139 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ACSL6Q9UKU0 697 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 SATB2Q9UPW6 733 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 GMEB1Q9Y692 573 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 USP24Q9UPU5 2620 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ACACAQ13085 2346 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 A8MUI8 341 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 CLIC1O00299 241 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 POLR1CO15160 346 aaPredicted RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 BRINP1O60477 761 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 CDC123O75794 336 aaPredicted RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ATXN8OSP0DMR3 200 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 HSD17B1P14061 328 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 FBLP22087 321 aaKnown RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ME2P23368 584 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 PTGER1P34995 402 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 MSX2P35548 267 aaPredicted RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 SOAT1P35610 550 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 XKP51811 444 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 EEFSECP57772 596 aaKnown RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 MC2RQ01718 297 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 LIPEQ05469 1076 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 CCDC116Q8IYX3 515 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 C10orf111Q8N326 155 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 LRRC25Q8N386 305 aaPredicted RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 TRIML2Q8N7C3 387 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 OR5AK3PQ8NH89 298 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 WDR60Q8WVS4 1066 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ANKRD9Q96BM1 317 aaPredicted RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 SLC35A5Q9BS91 424 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 SLC7A5P2Q9GIP4 190 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 KAT8Q9H7Z6 458 aaKnown RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 ZNF304Q9HCX3 659 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 FBXO8Q9NRD0 319 aa18.15■□□□□ 0.5
SPSB3-204ENST00000563741 MRPS33Q9Y291 106 aaKnown RBP18.15■□□□□ 0.5
SPSB3-204ENST00000563741 FER1L5A0AVI2 2057 aa18.14■□□□□ 0.5
SPSB3-204ENST00000563741 BLACEA4D250 179 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 H0YHG0 523 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 JRKO75564 520 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 GPR75O95800 540 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 FHP07954 510 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 CPMP14384 443 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 MPIP34949 423 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 GSK3BP49841 420 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 EIF3IQ13347 325 aaKnown RBP18.14■□□□□ 0.49
SPSB3-204ENST00000563741 SPATS1Q496A3 300 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPSB3-204ENST00000563741 ARHGAP40Q5TG30 622 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 ZNF595Q8IYB9 648 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 OR9A2Q8NGT5 310 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 PMEPA1Q969W9 287 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 COL26A1Q96A83 441 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 DENND2DQ9H6A0 471 aaPredicted RBP18.14■□□□□ 0.49
SPSB3-204ENST00000563741 AKAP7Q9P0M2 348 aaPredicted RBP18.14■□□□□ 0.49
SPSB3-204ENST00000563741 TRPC4Q9UBN4 977 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 SUCOQ9UBS9 1254 aaKnown RBP18.14■□□□□ 0.49
SPSB3-204ENST00000563741 POMPQ9Y244 141 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 LOXL2Q9Y4K0 774 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 PCDHGA8Q9Y5G5 932 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 SNX8Q9Y5X2 465 aa18.14■□□□□ 0.49
SPSB3-204ENST00000563741 APC2O95996 2303 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 A0A1W2PNU3 283 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-204ENST00000563741 B4E171 279 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 B4GALT2O60909 372 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 CIB2O75838 187 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 DXOO77932 396 aaKnown RBP18.13■□□□□ 0.49
SPSB3-204ENST00000563741 NTRK1P04629 796 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 TSPAN7P41732 249 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 ERV3-1Q14264 604 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 LTB4RQ15722 352 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 C1orf146Q5VVC0 180 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 PNPT1Q8TCS8 783 aaKnown RBP18.13■□□□□ 0.49
SPSB3-204ENST00000563741 OR1F2PQ96R84 312 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 DPH2Q9BQC3 489 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-204ENST00000563741 LANCL2Q9NS86 450 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 SLC22A11Q9NSA0 550 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 CLDN16Q9Y5I7 305 aa18.13■□□□□ 0.49
SPSB3-204ENST00000563741 RNF103-CHMP3A0A140T963 221 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 TGFBR3LH3BV60 316 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 UQCRC2P22695 453 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 PPP2R1BP30154 601 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 GPC1P35052 558 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 MVDP53602 400 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 ELF3P78545 371 aaPredicted RBP18.12■□□□□ 0.49
SPSB3-204ENST00000563741 ZNF385CQ66K41 422 aaPredicted RBP18.12■□□□□ 0.49
SPSB3-204ENST00000563741 IGF2-ASQ6U949 168 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 MED25Q71SY5 747 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 COX15Q7KZN9 410 aa18.12■□□□□ 0.49
SPSB3-204ENST00000563741 RAB11FIP2Q7L804 512 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms