RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PHF11Q9UIL8 331 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 NPTNQ9Y639 398 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 CDY1Q9Y6F8 540 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 DUOX2Q9NRD8 1548 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TMEM265A0A087WTH1 108 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TBC1D3KA0A087X1G2 549 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SMIM23A6NLE4 172 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 C17orf100A8MU93 164 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 H7C0C1 242 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 MATN2O00339 956 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TIMM8AO60220 97 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 CCNKO75909 580 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 PLEKHA8P1O95397 391 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 F10P00742 488 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 GHRHP01286 108 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 F7P08709 466 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 HOXD9P28356 352 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 MAS1LP35410 378 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 EIF2S3P41091 472 aaKnown RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 PTGFRP43088 359 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 MTNR1AP48039 350 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 NPY2RP49146 381 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CACNA2D1P54289 1103 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZNF45Q02386 682 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CSTF1Q05048 431 aaKnown RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 CYTH1Q15438 398 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TRIP10Q15642 601 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 NAB2Q15742 525 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZBTB6Q15916 424 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TMEM196Q5HYL7 178 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 LRRC73Q5JTD7 316 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 LIPJQ5W064 366 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CBLN3Q6UW01 205 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SYT9Q86SS6 491 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 KMT5CQ86Y97 462 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 FAM71AQ8IYT1 594 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 C1orf87Q8N0U7 546 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TMEM104Q8NE00 496 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CDKN2AIPNLQ96HQ2 116 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 IGSF21Q96ID5 467 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 MYADMQ96S97 322 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SLC38A1Q9H2H9 487 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 HACL1Q9UJ83 578 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ERVW-1Q9UQF0 538 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ACOT9Q9Y305 439 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 HYOU1Q9Y4L1 999 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 MROH6A6NGR9 719 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 C9JVG2 144 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 MKRN2OSH3BPM6 223 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CAPN5O15484 640 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 NDUFS4O43181 175 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SIAH2O43255 324 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 PPP1R11O60927 126 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 N4BP1O75113 896 aaKnown RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 GATBO75879 557 aaKnown RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 RGS9O75916 674 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 B3GAT3O94766 335 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 NUDT17P0C025 328 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 RRASP10301 218 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CPN1P15169 458 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 DRD1P21728 446 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 MAP3K8P41279 467 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 NDST1P52848 882 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 DUSP8Q13202 625 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 BFSP2Q13515 415 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZNF268Q14587 947 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 GPNMBQ14956 572 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 XKR6Q5GH73 641 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 C6orf10Q5SRN2 563 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 RNF43Q68DV7 783 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZNF530Q6P9A1 599 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 SIGLEC15Q6ZMC9 328 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SLC16A12Q6ZSM3 486 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ACAD11Q709F0 780 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SNX20Q7Z614 316 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 LDB1Q86U70 411 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 TDRPQ86YL5 185 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZNF34Q8IZ26 560 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 PDIK1LQ8N165 341 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CCDC185Q8N715 623 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 OR5M8Q8NGP6 311 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 RAET1EQ8TD07 263 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 LINC01599Q8WXQ3 324 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 PIGCQ92535 297 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ALG3Q92685 438 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SLC38A4Q969I6 547 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 TP53INP1Q96A56 240 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZBTB45Q96K62 511 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZIM3Q96PE6 472 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 OMDQ99983 421 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 APOL2Q9BQE5 337 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 RANBP3Q9H6Z4 567 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 MANSC1Q9H8J5 431 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CHMP1AQ9HD42 196 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 MYOZ2Q9NPC6 264 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 XPNPEP3Q9NQH7 507 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 FAM207AQ9NSI2 230 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 ZNF701Q9NV72 531 aaPredicted RBP4.5□□□□□ -1.69
SMG1-207ENST00000563235 GID8Q9NWU2 228 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms