RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 BUD31P41223 144 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 RPP38P78345 283 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 TNFRSF17Q02223 184 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 ID2Q02363 134 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 PCDH1Q08174 1060 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 HP1BP3Q5SSJ5 553 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 PRAMEF9Q5VWM5 478 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 KHDRBS2Q5VWX1 349 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 SHEQ5VZ18 495 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 VASNQ6EMK4 673 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 OR4C11Q6IEV9 310 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 LRRC70Q7Z2Q7 622 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 GPR180Q86V85 440 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 ZCCHC7Q8N3Z6 543 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 DIO2Q92813 273 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 TP53INP1Q96A56 240 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 NTNG2Q96CW9 530 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 GAL3ST4Q96RP7 486 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 MCMBPQ9BTE3 642 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 WWTR1Q9GZV5 400 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 DDX47Q9H0S4 455 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 PLEKHF2Q9H8W4 249 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 CALHM2Q9HA72 323 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 PRM3Q9NNZ6 103 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 SNX15Q9NRS6 342 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 CD274Q9NZQ7 290 aa14.45□□□□□ -0.1
HERPUD1-205ENST00000562914 MBD3L4A6NDZ8 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 MBD3L3A6NE82 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 MBD3L5A6NJ08 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 CLCA1A8K7I4 914 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 RTCAO00442 366 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 WISP3O95389 354 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 INHBBP09529 407 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 TRPC1P48995 793 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 ZNF136P52737 540 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 SLC37A1P57057 533 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 SLAMF1Q13291 335 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 EBPQ15125 230 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 RPS6KA2Q15349 733 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 DEPDC1Q5TB30 811 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 PACS2Q86VP3 889 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 WFDC11Q8NEX6 87 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 MBD3L2Q8NHZ7 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 RGMAQ96B86 450 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 WDR83Q9BRX9 315 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 YIPF4Q9BSR8 244 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 CD244Q9BZW8 370 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 JKAMPQ9P055 326 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 TSC22D4Q9Y3Q8 395 aa14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 MAP1AP78559 2803 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 FLNAP21333 2647 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-205ENST00000562914 A0A1B0GTL3 188 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ARHGEF9O43307 516 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 OR10H2O60403 315 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 CCNT2O60583 730 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 GPR75O95800 540 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 TGFB1P01137 390 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 CCDC166P0CW27 439 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 CD1DP15813 335 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 PIK3CBP42338 1070 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 CDK9P50750 372 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 RAP1GDS1P52306 607 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 DCAF7P61962 342 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 HERVK_113P63132 956 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ERVK-8P63133 956 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 CBLBQ13191 982 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 RCAN2Q14206 197 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 SCIMPQ6UWF3 145 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 OR4N5Q8IXE1 308 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 FBXO36Q8NEA4 188 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 OR7G3Q8NG95 312 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 SMPDL3BQ92485 455 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 CDKL2Q92772 493 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 RIT1Q92963 219 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ISL2Q96A47 359 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 PPWD1Q96BP3 646 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ZFP3Q96NJ6 502 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 DACH2Q96NX9 599 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ERVK-6Q9BXR3 956 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ANGPTL4Q9BY76 406 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 UBQLN3Q9H347 655 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 WDR41Q9HAD4 459 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 LYARQ9NX58 379 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 TXNDC16Q9P2K2 825 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 FETUBQ9UGM5 382 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 SNX12Q9UMY4 172 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 ERVK-19Q9WJR5 959 aa14.43□□□□□ -0.1
HERPUD1-205ENST00000562914 C2orf92A0A1B0GVN3 265 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 E7ESA3 106 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 HRKO00198 91 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 TRAPPC6AO75865 159 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 PCNAP12004 261 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 STMN1P16949 149 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 EPORP19235 508 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 GCKP35557 465 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 MASP1P48740 699 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 NRG3P56975 720 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 EEF1A1P68104 462 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 PHEXP78562 749 aa14.42□□□□□ -0.1
HERPUD1-205ENST00000562914 PDIA2Q13087 525 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms