RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 HERVK_113P63132 956 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 ERVK-8P63133 956 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 SLC10A1Q14973 349 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 GGTA1PQ4G0N0 100 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 GLE1Q53GS7 698 aaKnown RBP12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 FRG2Q64ET8 278 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 OR52E8Q6IFG1 317 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 LYPD8Q6UX82 237 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 RNF111Q6ZNA4 994 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 DGAT2L6Q6ZPD8 337 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 TRILQ7L0X0 811 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 MYRIPQ8NFW9 859 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 OR52B6Q8NGF0 335 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 ATP6V1E2Q96A05 226 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 FRG2BQ96QU4 278 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 SMC6Q96SB8 1091 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 CNPPD1Q9BV87 410 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 ERVK-6Q9BXR3 956 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 QPCTLQ9NXS2 382 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 TUBA8Q9NY65 449 aaPredicted RBP12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 AHSPQ9NZD4 102 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 ERVK-19Q9WJR5 959 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 RNF6Q9Y252 685 aa12.09□□□□□ -0.47
AC009055.1-201ENST00000562656 CAPN14A8MX76 684 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 NPIPA2E9PIF3 369 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 NPIPA3F8WFD2 350 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 G3V3Y1 287 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 HRKO00198 91 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PRKRAO75569 313 aaKnown RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 AIFM1O95831 613 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 HOXD4P09016 255 aaPredicted RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 FBXO45P0C2W1 286 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ACVR2AP27037 513 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 DNASE1L1P49184 302 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 NEK2P51955 445 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 CCNG1P51959 295 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ZNF267Q14586 743 aaPredicted RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 EBPQ15125 230 aaKnown RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PAGE2Q7Z2X7 111 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 TAGAPQ8N103 731 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 FBXW8Q8N3Y1 598 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 MNS1Q8NEH6 495 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 TRPC4APQ8TEL6 797 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 CHTF18Q8WVB6 975 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 SREK1Q8WXA9 508 aaKnown RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 SARAFQ96BY9 339 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PHF21BQ96EK2 531 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PAFAH2Q99487 392 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 FMO2Q99518 471 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 MRPL57Q9BQC6 102 aaKnown RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 WWTR1Q9GZV5 400 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ZBTB26Q9HCK0 441 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ZFP64Q9NPA5 681 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PNPLA3Q9NST1 481 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ZNF358Q9NW07 568 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 XPR1Q9UBH6 696 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 DMGDHQ9UI17 866 aaKnown RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PCTPQ9UKL6 214 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 BOKQ9UMX3 212 aaPredicted RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.08□□□□□ -0.48
AC009055.1-201ENST00000562656 ANKRD33BA6NCL7 494 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 FOXO6A8MYZ6 492 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 FAM47E-STBD1D6RA91 191 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 WDR1O75083 606 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 GUCY1B2O75343 617 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 ACSL3O95573 720 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 IGFBP2P18065 325 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 PIK3R1P27986 724 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 PIGAP37287 484 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 MAN2A2P49641 1150 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 NR0B1P51843 470 aaKnown RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 NUP107P57740 925 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 PMPCAQ10713 525 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 IFT88Q13099 833 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 TRAF3Q13114 568 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 NTRK2Q16620 822 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 UBAP2Q5T6F2 1119 aaKnown RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 TTC19Q6DKK2 380 aaPredicted RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 MEX3BQ6ZN04 569 aaKnown RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 LRRC25Q8N386 305 aaPredicted RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 C17orf47Q8NEP4 570 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 OR5M3Q8NGP4 307 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 C16orf45Q96MC5 204 aaPredicted RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 CDK15Q96Q40 435 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 GAL3ST4Q96RP7 486 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 SECISBP2Q96T21 854 aaKnown RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 C1QTNF3Q9BXJ4 246 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 MRPL46Q9H2W6 279 aaKnown RBP12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 CXorf21Q9HAI6 301 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 SLC24A3Q9HC58 644 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 ACKR4Q9NPB9 350 aa12.07□□□□□ -0.48
AC009055.1-201ENST00000562656 KCNJ16Q9NPI9 418 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms