RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CPN2P22792 545 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 TRPC1P48995 793 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 HNRNPFP52597 415 aaKnown RBP21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 OLR1P78380 273 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 PLIN5Q00G26 463 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 TNFRSF17Q02223 184 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 RUNX2Q13950 521 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 CAPRIN1Q14444 709 aaKnown RBP21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 C19orf48Q6RUI8 117 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 SHISA6Q6ZSJ9 500 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 ARPINQ7Z6K5 226 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 KIAA1143Q96AT1 154 aaPredicted RBP21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 CCDC115Q96NT0 180 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 PANX1Q96RD7 426 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 CDRT15Q96T59 188 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 KCMF1Q9P0J7 381 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 PCDHGA6Q9Y5G7 932 aa21.1■□□□□ 0.97
SYNGR3-202ENST00000562045 C21orf140B9A014 251 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 NKX2-8O15522 239 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 RDH16O75452 317 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 TLX1P31314 330 aaPredicted RBP21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 VWA2Q5GFL6 755 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 LRIF1Q5T3J3 769 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 OVCH1Q7RTY7 1134 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 SCUBE1Q8IWY4 988 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 ULK2Q8IYT8 1036 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 MVB12AQ96EY5 273 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 CGREF1Q99674 301 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 CLK4Q9HAZ1 481 aaKnown RBP21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 PRDM9Q9NQV7 894 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 HCN3Q9P1Z3 774 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 PDPK1O15530 556 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 ANP32DO95626 131 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 RAB40ALP0C0E4 278 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 FBLP22087 321 aaKnown RBP21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 SLC6A2P23975 617 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 AVPR1BP47901 424 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 IL10RAQ13651 578 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 DSG2Q14126 1118 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 NKG7Q16617 165 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 C18orf63Q68DL7 685 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 SLC48A1Q6P1K1 146 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 DNAJC14Q6Y2X3 702 aaPredicted RBP21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 CCDC81Q6ZN84 652 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 DNAJB14Q8TBM8 379 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 MIEF2Q96C03 454 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 INPP5KQ9BT40 448 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 ADA2Q9NZK5 511 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 UTS2RQ9UKP6 389 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 TCFL5Q9UL49 500 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 PCDHGB4Q9UN71 923 aa21.09■□□□□ 0.97
SYNGR3-202ENST00000562045 C9J4A7 227 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 EFNA3P52797 238 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 MPEG1Q2M385 716 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 CLECL1Q8IZS7 167 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 CA13Q8N1Q1 262 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 CIDECQ96AQ7 238 aaPredicted RBP21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 EXOSC8Q96B26 276 aaKnown RBP21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 CLPTM1LQ96KA5 538 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 SPSB2Q99619 263 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 GPR87Q9BY21 358 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 PAIP1Q9H074 479 aaKnown RBP21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 C5AR2Q9P296 337 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 TMEM181Q9P2C4 612 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 ABCD2Q9UBJ2 740 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 TRPC4Q9UBN4 977 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 PSME2Q9UL46 239 aa21.08■□□□□ 0.97
SYNGR3-202ENST00000562045 H0YHG0 523 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 JRKO75564 520 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 PRKRAO75569 313 aaKnown RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 SLC7A2P52569 658 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 RPS15P62841 145 aaKnown RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 BROXQ5VW32 411 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 NANOGP8Q6NSW7 305 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 PGM2L1Q6PCE3 622 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 LAPTM4BQ86VI4 370 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 PRSS58Q8IYP2 241 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 FBXW8Q8N3Y1 598 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 OR8J3Q8NGG0 315 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 ZBED6CLQ96FA7 236 aaPredicted RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 MESP1Q9BRJ9 268 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 YIPF2Q9BWQ6 316 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 SLC26A1Q9H2B4 701 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 SOX17Q9H6I2 414 aaPredicted RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 NANOGQ9H9S0 305 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 SLC35C2Q9NQQ7 365 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 VAPAQ9P0L0 249 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 GPN3Q9UHW5 284 aaPredicted RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 KCND3Q9UK17 655 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 CDC14AQ9UNH5 594 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 PCDHB14Q9Y5E9 798 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 A0A1W2PRB8 838 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 GLOD5A6NK44 160 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 H0YIG0 161 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 K7ENP7 123 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 CREG1O75629 220 aa21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 CPSF4O95639 269 aaKnown RBP21.07■□□□□ 0.96
SYNGR3-202ENST00000562045 UMODP07911 640 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms