RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TRPS1Q9UHF7 1281 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 MEMO1Q9Y316 297 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ASB4Q9Y574 426 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 DNAJC13O75165 2243 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 MYO9AB2RTY4 2548 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 AKAP9Q99996 3911 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 A0A1W2PR48 441 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 SMIM23A6NLE4 172 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 G3V3Y1 287 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 TFECO14948 347 aaPredicted RBP14.78□□□□□ -0.04
LMX1B-204ENST00000561065 ULK1O75385 1050 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 AIFM1O95831 613 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 HSD3B1P14060 373 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 HSD3B2P26439 372 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 HMOX2P30519 316 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 SLCO1A2P46721 670 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 ART3Q13508 389 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF678Q5SXM1 525 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 IL20RBQ6UXL0 311 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 RPTNQ6XPR3 784 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 BNC2Q6ZN30 1099 aaPredicted RBP14.78□□□□□ -0.04
LMX1B-204ENST00000561065 TICAM1Q8IUC6 712 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 LURAP1LQ8IV03 231 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 TMEM151AQ8N4L1 468 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 OR8K3Q8NH51 312 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 METTL6Q8TCB7 284 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 TRPC4APQ8TEL6 797 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 AGAP11Q8TF27 550 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 SELENOMQ8WWX9 145 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 MARVELD3Q96A59 401 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 PPWD1Q96BP3 646 aaKnown RBP14.78□□□□□ -0.04
LMX1B-204ENST00000561065 EPB41L4BQ9H329 900 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 COPS7AQ9UBW8 275 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 PSME2Q9UL46 239 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 ERVK-11Q9UQG0 969 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 KLF2Q9Y5W3 355 aaPredicted RBP14.78□□□□□ -0.04
LMX1B-204ENST00000561065 PKDREJQ9NTG1 2253 aa14.78□□□□□ -0.04
LMX1B-204ENST00000561065 GLOD5A6NK44 160 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 PROM1O43490 865 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 DLX3O60479 287 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 NADKO95544 446 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-204ENST00000561065 GBAP04062 536 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 CLPSP04118 112 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 ENO1P06733 434 aaKnown RBP14.77□□□□□ -0.04
LMX1B-204ENST00000561065 NUDT17P0C025 328 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 FAM58BPP0C7Q3 252 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 ABOP16442 354 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 KRT4P19013 534 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 CASP6P55212 293 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 CDH13P55290 713 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 LCP2Q13094 533 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF750Q32MQ0 723 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 MTFR2Q6P444 385 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 LYPD8Q6UX82 237 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 GPRIN3Q6ZVF9 776 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 CROCCP2Q86T23 111 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 DOLPP1Q86YN1 238 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 GPALPP1Q8IXQ4 340 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 GBP7Q8N8V2 638 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-204ENST00000561065 OR2M7Q8NG81 312 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 OR52N2Q8NGI0 321 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 OR5L2Q8NGL0 311 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 L3HYPDHQ96EM0 354 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 DGAT2Q96PD7 388 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 DMRTA2Q96SC8 542 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF382Q96SR6 550 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 TIMMDC1Q9NPL8 285 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 PLSCR2Q9NRY7 297 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 TEX10Q9NXF1 929 aaPredicted RBP14.77□□□□□ -0.04
LMX1B-204ENST00000561065 HRH3Q9Y5N1 445 aa14.77□□□□□ -0.04
LMX1B-204ENST00000561065 A0A1B0GTH9 108 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 A0A1W2PPM1 405 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 KLRC4-KLRK1H3BQV0 150 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 PPP6CO00743 305 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 CRCPO75575 148 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 SHBGP04278 402 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 CCL3P10147 92 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 NR2F6P10588 404 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 VSNL1P62760 191 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 PLIN5Q00G26 463 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 SGO1Q5FBB7 561 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 CCNYL2Q5T2Q4 361 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 C6orf163Q5TEZ5 329 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 SP5Q6BEB4 398 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-204ENST00000561065 ZYG11AQ6WRX3 759 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 CD163Q86VB7 1156 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 SLC34A3Q8N130 599 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 CCNYL1Q8N7R7 359 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 CAVIN3Q969G5 261 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 SENP5Q96HI0 755 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-204ENST00000561065 FBXL20Q96IG2 436 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 VPS29Q9UBQ0 182 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 SLC12A4Q9UP95 1085 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 LIPGQ9Y5X9 500 aa14.76□□□□□ -0.05
LMX1B-204ENST00000561065 PHF3Q92576 2039 aaKnown RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 FAM166BA8MTA8 275 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 C19orf84I3L1E1 186 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 HNRNPRO43390 633 aaKnown RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 CDC40O60508 579 aaKnown RBP eCLIP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 GPR75O95800 540 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms