RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 OR51I1Q9H343 314 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 OCIAD1Q9NX40 245 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 PTGFRNQ9P2B2 879 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 CTSFQ9UBX1 484 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF282Q9UDV7 671 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF225Q9UK10 706 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 PADI1Q9ULC6 663 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 VDAC3Q9Y277 283 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 PCDHB14Q9Y5E9 798 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 PCDHGA4Q9Y5G9 962 aa5.15□□□□□ -1.59
VPS13C-209ENST00000560637 ATRXP46100 2492 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PNMA8CA0A1B0GUJ8 204 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 FAM220BPB1ANY3 271 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 K7ESF4 209 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 MASP2O00187 686 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 P2RX6O15547 441 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 SEC14L5O43304 696 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 B4GAT1O43505 415 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 NOBOXO60393 691 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CLEC3AO75596 197 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 WFS1O76024 890 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 HLA-DQA2P01906 255 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 POU3F3P20264 500 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CD1CP29017 333 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 RPS9P46781 194 aaKnown RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CCL11P51671 97 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 NRG3P56975 720 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 GPR85P60893 370 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ELF3P78545 371 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PLCXD2Q0VAA5 305 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 TGIF1Q15583 401 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 NKAIN1Q4KMZ8 207 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 FLYWCH1Q4VC44 716 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF311Q5JNZ3 666 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CLEC12AQ5QGZ9 265 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 RNF111Q6ZNA4 994 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 LARP4Q71RC2 724 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 VTCN1Q7Z7D3 282 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 JAZF1Q86VZ6 243 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 LSRQ86X29 649 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ARMC8Q8IUR7 673 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PEX5LQ8IYB4 626 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PROKR1Q8TCW9 393 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 GPBAR1Q8TDU6 330 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 LRTOMTQ8WZ04 291 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 GAL3ST3Q96A11 431 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 SLC47A1Q96FL8 570 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CSF3RQ99062 836 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 MS4A8Q9BY19 250 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 UGT2B28Q9BY64 529 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 POLR1BQ9H9Y6 1135 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PELI2Q9HAT8 420 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 AMBNQ9NP70 447 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 RASSF1Q9NS23 344 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ZIM2Q9NZV7 527 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 H2AFY2Q9P0M6 372 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 IL20RAQ9UHF4 553 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 POLR1DQ9Y2S0 133 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PLXNA4Q9HCM2 1894 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PTPRQQ9UMZ3 2332 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 A0A1B0GTQ1 180 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 A0A1W2PS29 197 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 PLD2O14939 933 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 SCAMP2O15127 329 aaKnown RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 NOL3O60936 208 aaKnown RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 SNUPNO95149 360 aaKnown RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CPMP14384 443 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 FOLR3P41439 243 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CDKN2CP42773 168 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 IST1P53990 364 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CRISP3P54108 245 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CLDN8P56748 225 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF33BQ06732 778 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 TOP3AQ13472 1001 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 C16orf72Q14CZ0 275 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 LARS2Q15031 903 aaKnown RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 STPG1Q5TH74 334 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 OR52E8Q6IFG1 317 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ABHD17CQ6PCB6 329 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 CDK20Q8IZL9 346 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 VWA5B2Q8N398 1253 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF555Q8NEP9 628 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 OR52R1Q8NGF1 315 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 ZUFSPQ96AP4 578 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 OR2A14Q96R47 310 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 HOPXQ9BPY8 73 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 COL25A1Q9BXS0 654 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-209ENST00000560637 RAD21L1Q9H4I0 556 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 KRT84Q9NSB2 600 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 TMED5Q9Y3A6 229 aa5.14□□□□□ -1.59
VPS13C-209ENST00000560637 hCG_2014768A0A024R1R8 64 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 LRIT2A6NDA9 550 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 FLRT2O43155 660 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 KLK10O43240 276 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 PSMG1O95456 288 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 CH25HO95992 272 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 OCM2P0CE71 109 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 OCMP0CE72 109 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-209ENST00000560637 HSMCR30P0CW71 290 aa5.13□□□□□ -1.59
VPS13C-209ENST00000560637 FUT4P22083 530 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms