RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 CCDC28BQ9BUN5 200 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 CARD9Q9H257 536 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 THAP9Q9H5L6 903 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 NT5DC2Q9H857 520 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 FAM212BQ9NTI7 297 aaPredicted RBP3.06□□□□□ -1.92
USP8-211ENST00000560527 TUBGCP4Q9UGJ1 667 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 MOSPD1Q9UJG1 213 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 MGAT4AQ9UM21 535 aa3.06□□□□□ -1.92
USP8-211ENST00000560527 HCFC1P51610 2035 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 SALL1Q9NSC2 1324 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 SH3PXD2BA1X283 911 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 MACROD2A1Z1Q3 448 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 ACOD1A6NK06 481 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 CALCAP01258 141 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 HCKP08631 526 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 HOXD4P09016 255 aaPredicted RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 GATA1P15976 413 aaPredicted RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 IL4RP24394 825 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 SPRP35270 261 aaPredicted RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 PTGER3P43115 390 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 MTIF2P46199 727 aaKnown RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 GSK3BP49841 420 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 HNRNPFP52597 415 aaKnown RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 STARD6P59095 220 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 GALK2Q01415 458 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 CD300CQ08708 224 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 ITPK1Q13572 414 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 EXOSC7Q15024 291 aaKnown RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 CDC37Q16543 378 aaPredicted RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 CCL14Q16627 93 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 GPAT3Q53EU6 434 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 DCAF12Q5T6F0 453 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 AGAP7PQ5VUJ5 663 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 PRAMEF7Q5VXH5 474 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 LIPJQ5W064 366 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 MIER3Q7Z3K6 550 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 SLC22A16Q86VW1 577 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 BATF2Q8N1L9 274 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 SAMD12Q8N8I0 201 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 CHDHQ8NE62 594 aaPredicted RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 OR4F5Q8NH21 305 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 FBXO25Q8TCJ0 367 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 MGARPQ8TDB4 240 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 FAM222BQ8WU58 562 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 U2AF1L4Q8WU68 220 aaKnown RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 CCDC47Q96A33 483 aaKnown RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 C16orf58Q96GQ5 468 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 RUFY1Q96T51 708 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 SOSTQ9BQB4 213 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 FTHL17Q9BXU8 183 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 LRRCC1Q9C099 1032 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 HOMER3Q9NSC5 361 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 ANO10Q9NW15 660 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 ERVK-18Q9QC07 812 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 KCNN3Q9UGI6 736 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.05□□□□□ -1.92
USP8-211ENST00000560527 MRPL11Q9Y3B7 192 aaKnown RBP3.05□□□□□ -1.92
USP8-211ENST00000560527 CSAG2Q9Y5P2 127 aa3.05□□□□□ -1.92
USP8-211ENST00000560527 ABCC9O60706 1549 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 HTATSF1O43719 755 aaKnown RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 CRLF1O75462 422 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 BCAS2O75934 225 aaPredicted RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 TBX6O95947 436 aaPredicted RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 CXCL10P02778 98 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 CCDC159P0C7I6 412 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 AHCYP23526 432 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 MARCKSP29966 332 aaPredicted RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 ID1P41134 155 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 ACADSBP45954 432 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 NUMBP49757 651 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 KLF5Q13887 457 aaPredicted RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 EMC2Q15006 297 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 FBXL22Q6P050 247 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 NEK5Q6P3R8 708 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 EMBQ6PCB8 327 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 OLFM4Q6UX06 510 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 ASRGL1Q7L266 308 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 FGFRL1Q8N441 504 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 CHCHD4Q8N4Q1 142 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 POM121L12Q8N7R1 296 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 LEMD2Q8NC56 503 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 ZNRF1Q8ND25 227 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 TMEM185AQ8NFB2 350 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 KIAA1524Q8TCG1 905 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 URGCPQ8TCY9 931 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 SLC13A3Q8WWT9 602 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 P3H4Q92791 437 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 TOMM40LQ969M1 308 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 SPXQ9BT56 116 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 RAB11FIP5Q9BXF6 653 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 DDX47Q9H0S4 455 aaKnown RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 Q9HAA7 133 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 CCPG1Q9ULG6 757 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 STRAPQ9Y3F4 350 aaKnown RBP3.04□□□□□ -1.92
USP8-211ENST00000560527 CPQQ9Y646 472 aa3.04□□□□□ -1.92
USP8-211ENST00000560527 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.92
USP8-211ENST00000560527 NPC1L1Q9UHC9 1359 aa3.03□□□□□ -1.92
USP8-211ENST00000560527 FAM205AQ6ZU69 1335 aa3.03□□□□□ -1.92
USP8-211ENST00000560527 SYCE3A1L190 88 aa3.03□□□□□ -1.92
USP8-211ENST00000560527 FOXI3A8MTJ6 420 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms