RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PCGF2P35227 344 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 TSFMP43897 325 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 KCNJ10P78508 379 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 EEF1A2Q05639 463 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 FADDQ13158 208 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 MAP7Q14244 749 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 TEAD4Q15561 434 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 DUSP7Q16829 419 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 IRAK1BP1Q5VVH5 260 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 KLHL35Q6PF15 583 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 EIF3MQ7L2H7 374 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 CYGBQ8WWM9 190 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 FBXL20Q96IG2 436 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 C9orf16Q9BUW7 83 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 ASPSCR1Q9BZE9 553 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 CAPN10Q9HC96 672 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 ATXN7L1Q9ULK2 861 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 TMEM184BQ9Y519 407 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 MAU2Q9Y6X3 613 aa10.24□□□□□ -0.77
SNRPA1-211ENST00000560433 IGHV1OR21-1A0A087WYE8 117 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 CPED1A4D0V7 1026 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 G3V2T6 193 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 SEC24DO94855 1032 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 FABP3P05413 133 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 GNSP15586 552 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 MAPK11Q15759 364 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 TRMT12Q53H54 448 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 NHSL2Q5HYW2 709 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 TMEM154Q6P9G4 183 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 FAM111BQ6SJ93 734 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 CEP68Q76N32 757 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 SPRED1Q7Z699 444 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 DNAJC22Q8N4W6 341 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ZNF655Q8N720 491 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 OR7G2Q8NG99 324 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 OR52E4Q8NGH9 312 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 OR52J3Q8NH60 311 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 GATA6Q92908 595 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 TBC1D20Q96BZ9 403 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 PEX11GQ96HA9 241 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 SLC35G5Q96KT7 338 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 WFDC6Q9BQY6 131 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 RUBCNLQ9H714 662 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 IL1RAPQ9NPH3 570 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 LYARQ9NX58 379 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 RPS6KA6Q9UK32 745 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 PILRBQ9UKJ0 227 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 KLK4Q9Y5K2 254 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 SLC22A7Q9Y694 548 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 LILRA5A6NI73 299 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 JRKO75564 520 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 RASAL1O95294 804 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 SLC34A2O95436 690 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 LYNP07948 512 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ARAFP10398 606 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 CSF2RBP32927 897 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ARRB1P49407 418 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 SELENOWP63302 87 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 IL1RL1Q01638 556 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 HLA-BQ31612 363 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ZDHHC13Q8IUH4 622 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 CA13Q8N1Q1 262 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ARL10Q8N8L6 244 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 NUP43Q8NFH3 380 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 OR4K14Q8NGD5 310 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ELP4Q96EB1 424 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 BTBD9Q96Q07 612 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 NUDT22Q9BRQ3 303 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 TMEM38AQ9H6F2 299 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 PRMT8Q9NR22 394 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 OLAHQ9NV23 265 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ADPRHL2Q9NX46 363 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 RHCGQ9UBD6 479 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 DNAJB9Q9UBS3 223 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 ZNF451Q9Y4E5 1061 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 GPR179Q6PRD1 2367 aa10.23□□□□□ -0.77
SNRPA1-211ENST00000560433 C5orf58C9J3I9 102 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 CYR61O00622 381 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 CHST10O43529 356 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 FOXS1O43638 330 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 SLC28A2O43868 658 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 TFPTP0C1Z6 253 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 ALAS2P22557 587 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 SOX18P35713 384 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 GSTM5P46439 218 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 CMPK2Q5EBM0 449 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 DGAT2L6Q6ZPD8 337 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 TMPRSS9Q7Z410 1059 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 TSEN54Q7Z6J9 526 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 GAB3Q8WWW8 586 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 TCTN2Q96GX1 697 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 DOHHQ9BU89 302 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 SYNDIG1Q9H7V2 258 aa10.22□□□□□ -0.77
SNRPA1-211ENST00000560433 ANKHQ9HCJ1 492 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms