RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 TRIM45Q9H8W5 580 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-215ENST00000560424 EML4Q9HC35 981 aaKnown RBP8.64□□□□□ -1.03
SMAD3-215ENST00000560424 ANKHQ9HCJ1 492 aa8.64□□□□□ -1.03
SMAD3-215ENST00000560424 TAC3Q9UHF0 121 aa8.64□□□□□ -1.03
SMAD3-215ENST00000560424 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-215ENST00000560424 IKZF3Q9UKT9 509 aa8.64□□□□□ -1.03
SMAD3-215ENST00000560424 STK38LQ9Y2H1 464 aa8.64□□□□□ -1.03
SMAD3-215ENST00000560424 A0A1W2PPV9 198 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 NPEPPSL1A6NEC2 478 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 CLCA1A8K7I4 914 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 HSPB2A8KAH6 182 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 MAGEB17A8MXT2 336 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 SGK494L7N484 410 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 UBXN8O00124 270 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 HAX1O00165 279 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 SYT5O00445 386 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF195O14628 629 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 ITM2AO43736 263 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 PSIP1O75475 530 aaKnown RBP8.63□□□□□ -1.03
SMAD3-215ENST00000560424 GOSR1O95249 250 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 FGF4P08620 206 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 EPXP11678 715 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 GABRA1P14867 456 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 CD53P19397 219 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 BMP5P22003 454 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 HNMTP50135 292 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 RPL14P50914 215 aaKnown RBP8.63□□□□□ -1.03
SMAD3-215ENST00000560424 HSPB2Q16082 182 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 CCSMST1Q4G0I0 132 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 UNC50Q53HI1 259 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 ARL13AQ5H913 290 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-215ENST00000560424 CFAP157Q5JU67 520 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 THEMIS2Q5TEJ8 643 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 FAM91A1Q658Y4 838 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 SULT1C3Q6IMI6 304 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 KIF18BQ86Y91 864 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 KLHDC8AQ8IYD2 350 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 CIARTQ8N365 385 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-215ENST00000560424 PTGR2Q8N8N7 351 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-215ENST00000560424 PLPP5Q8NEB5 264 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 SARAFQ96BY9 339 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 FAM136AQ96C01 138 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 FAR2Q96K12 515 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 PARVBQ9HBI1 364 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 VTI1BQ9UEU0 232 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 TRPS1Q9UHF7 1281 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 PTBP2Q9UKA9 531 aaKnown RBP8.63□□□□□ -1.03
SMAD3-215ENST00000560424 FAM215AQ9Y5M1 114 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 DNAJC13O75165 2243 aa8.63□□□□□ -1.03
SMAD3-215ENST00000560424 KRT87PA6NCN2 255 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 A8MVJ9 347 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 ARHGEF33A8MVX0 844 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 SUPT3HB4E1H0 165 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 HAT1O14929 419 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 HDAC3O15379 428 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 P2RX6O15547 441 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 CRLF1O75462 422 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 SUPT3HO75486 399 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 DCTN3O75935 186 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 HSPA4LO95757 839 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 STATHP02808 62 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 GFAPP14136 432 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 IL10P22301 178 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 JAK1P23458 1154 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 ADH7P40394 386 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 BCL6P41182 706 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 MAN2A2P49641 1150 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PRDX1Q06830 199 aaKnown RBP8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PCDH1Q08174 1060 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 LCP2Q13094 533 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 POU4F3Q15319 338 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PFKFB4Q16877 469 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 RIPPLY2Q5TAB7 128 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 NDUFAF5Q5TEU4 345 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 METTL21CQ5VZV1 264 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 ICE2Q659A1 982 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 HMBOX1Q6NT76 420 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PODNL1Q6PEZ8 512 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 GK5Q6ZS86 529 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 RNF165Q6ZSG1 346 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 FRA10AC1Q70Z53 315 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PRSS41Q7RTY9 318 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PHC2Q8IXK0 858 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 LRRC75A-AS1Q8N1F1 130 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 AFAP1L2Q8N4X5 818 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 ZCCHC10Q8TBK6 192 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF483Q8TF39 744 aaPredicted RBP8.62□□□□□ -1.03
SMAD3-215ENST00000560424 TSLPQ969D9 159 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 RHBDF1Q96CC6 855 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PHF21BQ96EK2 531 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PEX11GQ96HA9 241 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 OR1F2PQ96R84 312 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 CCT7Q99832 543 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 TRIM54Q9BYV2 358 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 RABEP2Q9H5N1 569 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PLEKHF2Q9H8W4 249 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms