RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 QPCTLQ9NXS2 382 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACTR10Q9NZ32 417 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCDC85CA6NKD9 419 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 FAAHO00519 579 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 NPC1O15118 1278 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 MAGEB4O15481 346 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 UGT2B7P16662 529 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 TNFSF4P23510 183 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 PBX2P40425 430 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 FXYD4P59646 89 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 NETO2Q8NC67 525 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 PAPD5Q8NDF8 572 aaKnown RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SEMA6DQ8NFY4 1073 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLAMF9Q96A28 289 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 FAM124BQ9H5Z6 455 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 FKBPLQ9UIM3 349 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 INPPL1O15357 1258 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF780AO75290 641 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 MAS1P04201 325 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CDKN2BP42772 138 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZUFSPQ96AP4 578 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 HECW2Q9P2P5 1572 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 ARVCFO00192 962 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CPNE6O95741 557 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 PNPP00491 289 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CFIP05156 583 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CDONQ4KMG0 1287 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 FAM58AQ8N1B3 248 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 PDCD1LG2Q9BQ51 273 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 GATA5Q9BWX5 397 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACTRT3Q9BYD9 372 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CNTNAP3Q9BZ76 1288 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 VEGFDO43915 354 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 B4GALT2O60909 372 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 ABCG5Q9H222 651 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 WDR6Q9NNW5 1121 aaKnown RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 HES2Q9Y543 173 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCINQ13939 588 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 PNCKQ6P2M8 343 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 GJD4Q96KN9 370 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 TESQ9UGI8 421 aaKnown RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 A0A1W2PPK0 400 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 A8MU76 341 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 C17orf112F2Z3M2 114 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC22A5O76082 557 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SNRNP70P08621 437 aaKnown RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 CD52P31358 61 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 HES5Q5TA89 166 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 KIAA0895LQ68EN5 471 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR8K5Q8NH50 307 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC7A13Q8TCU3 470 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 C10orf82Q8WW14 230 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SORCS1Q8WY21 1168 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SDCBP2Q9H190 292 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR52A5Q9H2C5 316 aa13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC1A7O00341 560 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZDHHC11BP0C7U3 371 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 GPR33Q49SQ1 333 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 C6orf141Q5SZD1 244 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 RNF130Q86XS8 419 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 VWA5B2Q8N398 1253 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 GPR137CQ8N3F9 429 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 CARS2Q9HA77 564 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 LOC102723532A0A0G2JNH3 316 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 CPED1A4D0V7 1026 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ARPC5O15511 151 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ETV5P41161 510 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 SFRP5Q5T4F7 317 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR52W1Q6IF63 320 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 BAGE3Q86Y29 109 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 BAGE2Q86Y30 109 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 NPAS3Q8IXF0 933 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 LUZP4Q9P127 313 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 SERPINE2P07093 398 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 CD53P19397 219 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ELK4P28324 431 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 RPS10P46783 165 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 NDUFA6P56556 154 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 GRB2P62993 217 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ERMP1Q7Z2K6 904 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 PIGWQ7Z7B1 504 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 SCML4Q8N228 414 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 CYP2W1Q8TAV3 490 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 INPP4AQ96PE3 977 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 MRI1Q9BV20 369 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC38A1Q9H2H9 487 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 FZD10Q9ULW2 581 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 L1CAMP32004 1257 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 LCLAT1Q6UWP7 414 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 XKR5Q6UX68 686 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms