RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 REXO1L1PQ8IX06 675 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 TMEM132CQ8N3T6 1108 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 CNEP1R1Q8N9A8 125 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 FAM47BQ8NA70 645 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 ZPLD1Q8TCW7 415 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 ZNF597Q96LX8 424 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 GNRHR2Q96P88 292 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 PPP1R2P1Q96PQ5 205 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 KRT12Q99456 494 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 KLHL4Q9C0H6 718 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 KLHL31Q9H511 634 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 NENFQ9UMX5 172 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 MAPRE3Q9UPY8 281 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 JRKLQ9Y4A0 524 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
PPP1R3E-204ENST00000559942 A0A1W2PNV4 684 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CTAGE15A4D2H0 777 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CCT8L1PA6NM43 557 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 APOC4-APOC2K7ER74 178 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CLOCKO15516 846 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 APOC2P02655 101 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 ESR1P03372 595 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CSF3P09919 207 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 TPSB2P20231 275 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 ATP5DP30049 168 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 MARCKSL1P49006 195 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 SIRPAP78324 504 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 PWP1Q13610 501 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CUL1Q13616 776 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 TPSAB1Q15661 275 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 ELAVL1Q15717 326 aaKnown RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 PIGGQ5H8A4 983 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 BICRALQ6AI39 1079 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 ALKBH2Q6NS38 261 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 SYT10Q6XYQ8 523 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 MBOAT1Q6ZNC8 495 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 BBS12Q6ZW61 710 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 YRDCQ86U90 279 aaKnown RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CTAGE6Q86UF2 777 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 KLHDC8BQ8IXV7 354 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 C10orf67Q8IYJ2 551 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 OR5L2Q8NGL0 311 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 SLC2A12Q8TD20 617 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 PTPMT1Q8WUK0 201 aaPredicted RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 ATL1Q8WXF7 558 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 DAZLQ92904 295 aaKnown RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 UBE2FQ969M7 185 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 SPACA9Q96E40 222 aaPredicted RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 BIRC8Q96P09 236 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 FAM129AQ9BZQ8 928 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CNOT11Q9UKZ1 510 aaKnown RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 RRP15Q9Y3B9 282 aaKnown RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 RNF115Q9Y4L5 304 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 CHCHD2Q9Y6H1 151 aaPredicted RBP8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 DNAH1Q9P2D7 4330 aa8.4□□□□□ -1.06
PPP1R3E-204ENST00000559942 C17orf105B2RV13 164 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 M0QZ24 198 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 TRIM3O75382 744 aaPredicted RBP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 GAS8O95995 478 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 HPNP05981 417 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 FESP07332 822 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 TMEM253P0C7T8 217 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 SAT1P21673 171 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 RPS3P23396 243 aaKnown RBP eCLIP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 GGT5P36269 586 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 GRIA1P42261 906 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 RPL21P46778 160 aaKnown RBP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 SLC6A12P48065 614 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 MASP1P48740 699 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 BTN3A2P78410 334 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 IRX1P78414 480 aaPredicted RBP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 ACVR1Q04771 509 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 RUNX2Q13950 521 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 RAB35Q15286 201 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 PARP6Q2NL67 630 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 NIPAL1Q6NVV3 410 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 LRRC6Q86X45 466 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 WFDC8Q8IUA0 241 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 GRAMD2AQ8IUY3 354 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 MORN4Q8NDC4 146 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 PPHLN1Q8NEY8 458 aaKnown RBP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 HTRA1Q92743 480 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 DIO2Q92813 273 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 NEUROG1Q92886 237 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 WNT2BQ93097 391 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 STARD4Q96DR4 205 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 PGM2Q96G03 612 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 SOX7Q9BT81 388 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 CNIH4Q9P003 139 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 DMGDHQ9UI17 866 aaKnown RBP8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 DTX4Q9Y2E6 619 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 CRYL1Q9Y2S2 319 aa8.39□□□□□ -1.07
PPP1R3E-204ENST00000559942 GOLGA6L9A6NEM1 432 aa8.38□□□□□ -1.07
PPP1R3E-204ENST00000559942 GOLGA8KD6RF30 607 aa8.38□□□□□ -1.07
PPP1R3E-204ENST00000559942 E5RI56 91 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms