RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ELAVL4P26378 380 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 GPC1P35052 558 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TIE1P35590 1138 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CRISP3P54108 245 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 UGT2B15P54855 530 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CASP9P55211 416 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 LIM2P55344 173 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 RPS15AP62244 130 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SNRPGP62308 76 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 OLR1P78380 273 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ALDH6A1Q02252 535 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HYAL1Q12794 435 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 COX10Q12887 443 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HYAL2Q12891 473 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ILKQ13418 452 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TP53BP2Q13625 1128 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PUM1Q14671 1186 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CEBPEQ15744 281 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 DUSP7Q16829 419 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM196Q5HYL7 178 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 DCST1Q5T197 706 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 MEDAGQ5VYS4 303 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SLX4IPQ5VYV7 408 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 FRMPD2BQ6IN97 320 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SLC48A1Q6P1K1 146 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 KLHL17Q6TDP4 642 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF793Q6ZN11 406 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF367Q7RTV3 350 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SLC46A3Q7Z3Q1 461 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PAQR7Q86WK9 346 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CCDC103Q8IW40 242 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SAMD14Q8IZD0 417 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 GJD3Q8N144 294 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SMYD1Q8NB12 490 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 DRAXINQ8NBI3 349 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 AQP11Q8NBQ7 271 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 MINDY2Q8NBR6 621 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 FAM46DQ8NEK8 389 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 OR9Q2Q8NGE9 314 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 OR14C36Q8NHC7 312 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SUN3Q8TAQ9 357 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 NT5CQ8TCD5 201 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CHPT1Q8WUD6 406 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 GGHQ92820 318 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 GAL3ST3Q96A11 431 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SLC22A18Q96BI1 424 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ATG2BQ96BY7 2078 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SH3YL1Q96HL8 342 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 RIPOR3Q96MK2 946 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 C17orf62Q9BQA9 187 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CDCA4Q9BXL8 241 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM121BQ9BXQ6 578 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ABCG4Q9H172 646 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 OR51I1Q9H343 314 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SERHL2Q9H4I8 314 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 IGFLR1Q9H665 355 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PRDM7Q9NQW5 492 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ZCCHC3Q9NUD5 404 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 DNAAF2Q9NVR5 837 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 RLIMQ9NVW2 624 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CLN6Q9NWW5 311 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF226Q9NYT6 803 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 OR6C2Q9NZP2 312 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SEC14L3Q9UDX4 400 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 MSRAQ9UJ68 235 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CES1P1Q9UKY3 287 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PCOLCE2Q9UKZ9 415 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ENTPD4Q9Y227 616 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SLC9A8Q9Y2E8 581 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PCDHGA4Q9Y5G9 962 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 MUC3AQ02505 3323 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3DA0A087WVF3 549 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3IA0A087WXS9 549 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3EA0A087X179 549 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3KA0A087X1G2 549 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 A0A1W2PRQ8 180 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3FA6NER0 549 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3LB9A6J9 549 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 FFAR1O14842 300 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 EMC8O43402 210 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 ERI3O43414 337 aaKnown RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 SLC28A2O43868 658 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 CNOT3O75175 753 aaKnown RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 ZBTB11O95625 1053 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 APBB3O95704 486 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 SERPIND1P05546 499 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 LCKP06239 509 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 IFI6P09912 130 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D3HP0C7X1 549 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 NR2F1P10589 423 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 F3P13726 295 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 HOXB2P14652 356 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 CD36P16671 472 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 CHMP24386 653 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 PEBP1P30086 187 aaKnown RBP7.64□□□□□ -1.19
SMAD3-212ENST00000559937 SLC19A1P41440 591 aa7.64□□□□□ -1.19
SMAD3-212ENST00000559937 CTSKP43235 329 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms