RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 GPX5O75715 221 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 H1F0P07305 194 aaKnown RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 SLC35G4P0C7Q5 338 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 TNNI3P19429 210 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 SOX3P41225 446 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 SSR2P43308 183 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 UGT2B15P54855 530 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 RPA4Q13156 261 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 GPR19Q15760 415 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 AGAP7PQ5VUJ5 663 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 PLAG1Q6DJT9 500 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 PAQR6Q6TCH4 344 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 PARP16Q8N5Y8 322 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 JPH3Q8WXH2 748 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 SLC35G5Q96KT7 338 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 C12orf66Q96MD2 445 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 ASB16Q96NS5 453 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 TREX2Q9BQ50 279 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 CDCA4Q9BXL8 241 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 NXF2Q9GZY0 626 aaKnown RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 NEUROD4Q9HD90 331 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 ARRDC5A6NEK1 342 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 WWP2O00308 870 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ADAP00813 363 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ALOX5P09917 674 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 CXCR2P25025 360 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 GPC1P35052 558 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 FRKP42685 505 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SLC15A1P46059 708 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 XKP51811 444 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 DUSP2Q05923 314 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 TARDBPQ13148 414 aaKnown RBP eCLIP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 TCEA2Q15560 299 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 OR4C11Q6IEV9 310 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 GET4Q7L5D6 327 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 AMER2Q8N7J2 671 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 TCEANCQ8N8B7 351 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 POC5Q8NA72 575 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 MINDY2Q8NBR6 621 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 PSD4Q8NDX1 1056 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SLC7A13Q8TCU3 470 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ZBED6CLQ96FA7 236 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ZNF354BQ96LW1 612 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 PRR14Q9BWN1 585 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 HDAC8Q9BY41 377 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SLC25A19Q9HC21 320 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ANKHQ9HCJ1 492 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 CCDC59Q9P031 241 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 A4GNTQ9UNA3 340 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 KLHL20Q9Y2M5 609 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 NINQ8N4C6 2090 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 KIAA0100Q14667 2235 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SH3D21A4FU49 640 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 TBX19O60806 448 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 CSO75390 466 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ERAL1O75616 437 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 NTN1O95631 604 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 EPPINO95925 133 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 TP53P04637 393 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 C8orf89P0DMQ9 161 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 NR2F1P10589 423 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 NCBP2P52298 156 aaKnown RBP eCLIP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ARHGAP19Q14CB8 494 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 IRF4Q15306 451 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 NDUFAF5Q5TEU4 345 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 FAM46CQ5VWP2 391 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 PODNL1Q6PEZ8 512 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 RTL10Q7L3V2 364 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 C11orf74Q86VG3 221 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SLC34A3Q8N130 599 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 C9orf43Q8TAL5 461 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 CREB3L4Q8TEY5 395 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 FGF13Q92913 245 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ITFG2Q969R8 447 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 CNPPD1Q9BV87 410 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 QRSL1Q9H0R6 528 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 POLR2J3Q9H1A7 115 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 SYNPO2LQ9H987 977 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 HHATLQ9HCP6 504 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 EXOSC4Q9NPD3 245 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 ZCCHC3Q9NUD5 404 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 GIN1Q9NXP7 522 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 TVP23BQ9NYZ1 205 aa9.5□□□□□ -0.89
LRRC28-216ENST00000559819 CNOT2Q9NZN8 540 aaKnown RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 KIF26AQ9ULI4 1882 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-216ENST00000559819 A0A0A6YYD5 115 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 OR52A4PA6NMU1 304 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 CCRL2O00421 344 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 FAAHO00519 579 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 CTDSP2O14595 271 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 PGRMC2O15173 223 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 KDM1AO60341 852 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 DLGAP3O95886 979 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 PAK4O96013 591 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-216ENST00000559819 ALOX12P18054 663 aa9.49□□□□□ -0.89
LRRC28-216ENST00000559819 S100A5P33763 92 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms