RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 SLC26A1Q9H2B4 701 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 RAD21L1Q9H4I0 556 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 GSTO2Q9H4Y5 243 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 NECTIN3Q9NQS3 549 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 ZIM2Q9NZV7 527 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 CCDC167Q9P0B6 97 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 MARCH4Q9P2E8 410 aaPredicted RBP5.55□□□□□ -1.52
USP3-212ENST00000559276 MAP10Q9P2G4 905 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 IFT80Q9P2H3 777 aaPredicted RBP5.55□□□□□ -1.52
USP3-212ENST00000559276 CTSFQ9UBX1 484 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 POLG2Q9UHN1 485 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 LEF1Q9UJU2 399 aaPredicted RBP5.55□□□□□ -1.52
USP3-212ENST00000559276 FBXL4Q9UKA2 621 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 RIMKLBQ9ULI2 386 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 CDC14AQ9UNH5 594 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 PLCL2Q9UPR0 1127 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 SLC5A6Q9Y289 635 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 TDRKHQ9Y2W6 561 aaKnown RBP5.55□□□□□ -1.52
USP3-212ENST00000559276 FAM32AQ9Y421 112 aaKnown RBP5.55□□□□□ -1.52
USP3-212ENST00000559276 PCDHGB1Q9Y5G3 927 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
USP3-212ENST00000559276 CPAMD8Q8IZJ3 1885 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 AKAP9Q99996 3911 aa5.55□□□□□ -1.52
USP3-212ENST00000559276 RP1L1Q8IWN7 2480 aaPredicted RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 POLEQ07864 2286 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 MYOCOSA0A1B0GUC4 107 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 A0A1B0GX78 115 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 A0A1W2PPV9 198 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 A0A1W2PPW3 197 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 TCRBV5S2A0A599 114 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ISPDA4D126 451 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 FITM1A5D6W6 292 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 TMEM247A6NEH6 219 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ISM1B1AKI9 464 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 K7EPI3 171 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 FXYD1O00168 92 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 NME4O00746 187 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 DSCR3O14972 297 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 AZIN1O14977 448 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 SUPT3HO75486 399 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 WISP2O76076 250 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 KLHL18O94889 574 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 SLCO2B1O94956 709 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 FKBP9O95302 570 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 MLYCDO95822 493 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CHEK2O96017 543 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 GOT2P00505 430 aaKnown RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 FTH1P02794 183 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CCDC159P0C7I6 412 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 PRR35P0CG20 571 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CDH1P12830 882 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 IL1RNP18510 177 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CD9P21926 228 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 SLC6A2P23975 617 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ARNTP27540 789 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 AOAHP28039 575 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 PSMB5P28074 263 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 MSX2P35548 267 aaPredicted RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 OR1D4P47884 311 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 GLRBP48167 497 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 RAB28P51157 221 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ALDH3A2P51648 485 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 HNRNPFP52597 415 aaKnown RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 EFNA3P52797 238 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ARSFP54793 590 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CDH15P55291 814 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 KCNK10P57789 538 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 SNRPNP63162 240 aaKnown RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 MVKQ03426 396 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 AIMP2Q13155 320 aaKnown RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 KRR1Q13601 381 aaKnown RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 DAG1Q14118 895 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CYP51A1Q16850 503 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ZC3H12BQ5HYM0 836 aaKnown RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 FGD3Q5JSP0 725 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ZNF678Q5SXM1 525 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 AGAP7PQ5VUJ5 663 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 GPR107Q5VW38 600 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 PRAMEF13Q5VWM6 474 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 LYPLAL1Q5VWZ2 237 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 KANK2Q63ZY3 851 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ZNF324BQ6AW86 544 aaPredicted RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 GTF2IRD2BQ6EKJ0 949 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 FRMPD2BQ6IN97 320 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 TUBA3EQ6PEY2 450 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CYP2R1Q6VVX0 501 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 TTLL10Q6ZVT0 673 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 THAP5Q7Z6K1 395 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 LDB1Q86U70 411 aaPredicted RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 GTF2IRD2Q86UP8 949 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 ANKRD13BQ86YJ7 626 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 LACC1Q8IV20 430 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 SPNS2Q8IVW8 549 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 CEP97Q8IW35 865 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 C8orf59Q8N0T1 100 aaPredicted RBP5.54□□□□□ -1.52
USP3-212ENST00000559276 SHISA5Q8N114 240 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 PARP8Q8N3A8 854 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 DPP10Q8N608 796 aa5.54□□□□□ -1.52
USP3-212ENST00000559276 FAM156AQ8NDB6 213 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms