RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TRPC5OSA6NMA1 111 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 MYO1GB0I1T2 1018 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 C17orf105B2RV13 164 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 E9PBE3 544 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 PEX12O00623 359 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SCAMP2O15127 329 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 KLHL41O60662 606 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SLC35E2P0CK97 266 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 DRD2P14416 443 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SSTR4P31391 388 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SOX11P35716 441 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 CCL11P51671 97 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SOX8P57073 446 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 C21orf58P58505 322 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 UFM1P61960 85 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 MRPS35P82673 323 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 SMU1Q2TAY7 513 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 PRICKLE4Q2TBC4 344 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 BTBD16Q32M84 506 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 ZNF628Q5EBL2 1059 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 PLAG1Q6DJT9 500 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 BORAQ6PGQ7 559 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 IKBIPQ70UQ0 350 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 CCDC116Q8IYX3 515 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 ST13P4Q8IZP2 240 aaPredicted RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 SIRT6Q8N6T7 355 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 TMEM102Q8N9M5 508 aaPredicted RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 OR4K14Q8NGD5 310 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 OR9A2Q8NGT5 310 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SLC2A12Q8TD20 617 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 APOBEC4Q8WW27 367 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 THOC3Q96J01 351 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 TUBB6Q9BUF5 446 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 FAIM2Q9BWQ8 316 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 GLIPR2Q9H4G4 154 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 ZNF385DQ9H6B1 395 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 ZNF552Q9H707 407 aaPredicted RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 LIN28AQ9H9Z2 209 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 CXorf21Q9HAI6 301 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SLC35C2Q9NQQ7 365 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 TAS2R7Q9NYW3 318 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 NOP53Q9NZM5 478 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 EHD3Q9NZN3 535 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 C19orf25Q9UFG5 118 aaPredicted RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 ATP6V1HQ9UI12 483 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 ZNF639Q9UID6 485 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 DTX4Q9Y2E6 619 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 CSAG2Q9Y5P2 127 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 PIEZO2Q9H5I5 2752 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 SPENQ96T58 3664 aaKnown RBP10.15□□□□□ -0.78
TPM1-217ENST00000559108 BLACEA4D250 179 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 SLCO1B7G3V0H7 640 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 POLR3GO15318 223 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 TBX19O60806 448 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 SCN2BO60939 215 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 CBX7O95931 251 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 IFNA16P05015 189 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ATP1B1P05026 303 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ITGB2P05107 769 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 SERPINA7P05543 415 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 PRPS2P11908 318 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 PIK3R1P27986 724 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 TLX1P31314 330 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 LSP1P33241 339 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 FRKP42685 505 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 CDK9P50750 372 aaKnown RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 PGDP52209 483 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 CLDN8P56748 225 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ACTN3Q08043 901 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 AIMP2Q13155 320 aaKnown RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 SERTAD2Q14140 314 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 LY6DQ14210 128 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 EXOSC7Q15024 291 aaKnown RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 TERF2Q15554 542 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 SPRED3Q2MJR0 410 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 TRMT12Q53H54 448 aaKnown RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 COLEC12Q5KU26 742 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 FHL5Q5TD97 284 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ZNF468Q5VIY5 522 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 NXNQ6DKJ4 435 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 H3F3CQ6NXT2 135 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ZNF551Q7Z340 670 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 C9orf40Q8IXQ3 194 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 GALNT16Q8N428 558 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ZNF615Q8N8J6 731 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 B3GNT7Q8NFL0 401 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 OR7G2Q8NG99 324 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 KAT2AQ92830 837 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 CTHRC1Q96CG8 243 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 ZNF764Q96H86 408 aaPredicted RBP10.14□□□□□ -0.79
TPM1-217ENST00000559108 FBXL20Q96IG2 436 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 AMDHD1Q96NU7 426 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 CATSPER2Q96P56 530 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 IP6K3Q96PC2 410 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 DGAT2Q96PD7 388 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 LPAR4Q99677 370 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 TMEM120AQ9BXJ8 343 aa10.14□□□□□ -0.79
TPM1-217ENST00000559108 BRINP2Q9C0B6 783 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms