RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C1orf52Q8N6N3 182 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 OR2M7Q8NG81 312 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 EPS8L3Q8TE67 593 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 AGAP11Q8TF27 550 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 MZB1Q8WU39 189 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 MTBPQ96DY7 904 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 KCNA7Q96RP8 456 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 SHCBP1LQ9BZQ2 653 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 AHSPQ9NZD4 102 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 TNFRSF10DQ9UBN6 386 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 EMCNQ9ULC0 261 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 TLDC2A0PJX2 215 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 DYRK3O43781 588 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 NADKO95544 446 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-208ENST00000558827 ESRRBO95718 433 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 MLYCDO95822 493 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 ATP5F1P24539 256 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-208ENST00000558827 HMOX2P30519 316 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 MAPK12P53778 367 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 HMGCS1Q01581 520 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 CDSNQ15517 529 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 CMPK2Q5EBM0 449 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 PIGGQ5H8A4 983 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 NDUFAF5Q5TEU4 345 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 OR52E8Q6IFG1 317 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 FAM111BQ6SJ93 734 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 RTL4Q6ZR62 310 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 FAM47EQ6ZV65 393 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 GPRIN3Q6ZVF9 776 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 DOLPP1Q86YN1 238 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 PRR22Q8IZ63 422 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 ST13P4Q8IZP2 240 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-208ENST00000558827 FAM13CQ8NE31 585 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 ADCY4Q8NFM4 1077 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 OR4K14Q8NGD5 310 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 OR2W6PQ8NHA6 318 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 METTL6Q8TCB7 284 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 ZBTB9Q96C00 473 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 FBXL20Q96IG2 436 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 TUBA8Q9NY65 449 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-208ENST00000558827 PSD3Q9NYI0 1048 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 ZNF835Q9Y2P0 537 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 HRH3Q9Y5N1 445 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 LIPGQ9Y5X9 500 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 PKDREJQ9NTG1 2253 aa11.57□□□□□ -0.56
SMAD3-208ENST00000558827 FREM3P0C091 2139 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 ATP6AP2A0A1C7CYW4 349 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 NME6O75414 186 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 ATP6AP2O75787 350 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 SEMA3DO95025 777 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CLPSP04118 112 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CELA3AP09093 270 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 SLC35E2P0CK97 266 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 KRT15P19012 456 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 IMPDH1P20839 514 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CNR1P21554 472 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 SERPINB3P29508 390 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 PTGS2P35354 604 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 DEKP35659 375 aaKnown RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 PRKAA2P54646 552 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 DUSP2Q05923 314 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 GALNT1Q10472 559 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 TBL3Q12788 808 aaKnown RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 EXOSC7Q15024 291 aaKnown RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 NNATQ16517 81 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 GGTA1PQ4G0N0 100 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 OPN5Q6U736 354 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 SLC29A4Q7RTT9 530 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 PAGE2Q7Z2X7 111 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CD163Q86VB7 1156 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 C4orf33Q8N1A6 199 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CCDC63Q8NA47 563 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 ZFP62Q8NB50 900 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 POGLUT1Q8NBL1 392 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 SIMC1Q8NDZ2 872 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 OR5M9Q8NGP3 310 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 C16orf52Q8NHV5 167 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CDC26Q8NHZ8 85 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 TM4SF18Q96CE8 201 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 JSRP1Q96MG2 331 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 EBPLQ9BY08 206 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 TTTY12Q9BZ98 90 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 BRINP2Q9C0B6 783 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 CXorf21Q9HAI6 301 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 MID1IP1Q9NPA3 183 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 TRPS1Q9UHF7 1281 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 MEMO1Q9Y316 297 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 PCDHA9Q9Y5H5 950 aa11.56□□□□□ -0.56
SMAD3-208ENST00000558827 V9GYY5 206 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-208ENST00000558827 NPIPA2E9PIF3 369 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 NPIPA3F8WFD2 350 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 PRRG2O14669 202 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 KRT6AP02538 564 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 KRT6BP04259 564 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms